Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| Q9NVE7 | PANK4 | 4'-phosphopantetheine phosphatase (EC 3.1.3.-) (Inactive … | Homo sapiens (Human) | 773 aa |
Protein Details: Q9NVE7 (PANK4)
Protein Information
| Accession | Q9NVE7 |
|---|---|
| Protein Names | 4'-phosphopantetheine phosphatase (EC 3.1.3.-) (Inactive pantothenic acid kinase 4) (hPanK4) |
| Gene Symbol | PANK4 |
| Organism | Homo sapiens (Human) |
| Length | 773 aa |
| Isoforms | No isoforms |
| Related PMIDs | 24357059 31251020 (mass) 32651440 (mass) 36430497 (mass) |
| Database Sources | SwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MAECGASGSG11SSGDSLDKSI21TLPPDEIFRN31LENAKRFAID41IGGSLTKLAY
51-10051YSTVQHKVAK61VRSFDHSGKD71TEREHEPPYE81ISVQEEITAR91LHFIKFENTY
101-150101IEACLDFIKD111HLVNTETKVI121QATGGGAYKF131KDLIEEKLRL141KVDKEDVMTC
151-200151LIKGCNFVLK161NIPHEAFVYQ171KDSDPEFRFQ181TNHPHIFPYL191LVNIGSGVSI
201-250201VKVETEDRFE211WVGGSSIGGG221TFWGLGALLT231KTKKFDELLH241LASRGQHSNV
251-300251DMLVRDVYGG261AHQTLGLSGN271LIASSFGKSA281TADQEFSKED291MAKSLLHMIS
301-350301NDIGQLACLH311ARLHSLDRVY321FGGFFIRGHP331VTMRTITYSI341NFFSKGEVQA
351-400351LFLRHEGYLG361AIGAFLKGAE371QDNPNQYSWG381ENYAGSSGLM391SASPELGPAQ
401-450401RARSGTFDLL411EMDRLERPLV421DLPLLLDPPS431YVPDTVDLTD441DALARKYWLT
451-500451CFEEALDGVV461KRAVASQPDS471VDAAERAEKF481RQKYWNKLQT491LRQQPFAYGT
501-550501LTVRSLLDTR511EHCLNEFNFP521DPYSKVKQRE531NGVALRCFPG541VVRSLDALGW
551-600551EERQLALVKG561LLAGNVFDWG571AKAVSAVLES581DPYFGFEEAK591RKLQERPWLV
601-650601DSYSEWLQRL611KGPPHKCALI621FADNSGIDII631LGVFPFVREL641LLRGTEVILA
651-700651CNSGPALNDV661THSESLIVAE671RIAGMDPVVH681SALQEERLLL691VQTGSSSPCL
701-750701DLSRLDKGLA711ALVRERGADL721VVIEGMGRAV731HTNYHAALRC741ESLKLAVIKN
751-773751AWLAERLGGR761LFSVIFKYEV771PAE
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 4 | - | - | - |
GPS-Palm: 0.92
Deep-Palm: 0.05
|
|
| 104 | - | - | - |
Deep-Palm: 0.40
|
|
| 150 | - | - | - |
GPS-Palm: 0.78
Deep-Palm: 0.92
|
|
| 155 | - | - | - |
GPS-Palm: 0.79
Deep-Palm: 0.36
|
|
| 308 | - | - | - |
GPS-Palm: 0.79
Deep-Palm: 0.93
|
|
| 451 | - | - | - |
GPS-Palm: 0.76
Deep-Palm: 0.97
|
|
| 513 | - | - | - |
Deep-Palm: 0.85
|
|
| 537 | - | - | - |
GPS-Palm: 0.77
Deep-Palm: 0.97
|
|
| 617 | - | - | - |
Deep-Palm: 0.40
|
|
| 651 | - | - | - |
GPS-Palm: 0.89
Deep-Palm: 0.96
|
|
| 699 | - | - | - |
GPS-Palm: 0.93
Deep-Palm: 0.98
|
|
| 740 | - | - | - |
GPS-Palm: 0.68
Deep-Palm: 0.85
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
1
HUVECs
Specificity: 0.250
1/1 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
3
Cerebral Cortex (Mass)
Specificity: 0.750
3/4 (75.0%)
Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.
Conservation score for cysteine
PhyloP for Cysteine
PhastCons Conservation Scores for Cysteine
TCGA Cysteine Mutation Information
Note: Mutations indicate amino acid changes that may create potential palmitoylation sites.
| Position | Amino Acid Change | Frequency | Type | Function | Cancer Type |
|---|---|---|---|---|---|
| 73 | R → C | 0.002506 | SNP | Missense Mutation | COAD |
| 106 | D → _F107insSCLD | 0.002747 | INS | In Frame Ins | LIHC |
| 504 | R → C | 0.002545 | SNP | Missense Mutation | GBM |
| 617 | C → C | 0.001887 | SNP | Silent | UCEC |
| 651 | C → F | 0.005435 | SNP | Missense Mutation | ESCA |
| 728 | R → C | 0.002506 | SNP | Missense Mutation | COAD |