Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| Q9QUI0 | Rhoa | Transforming protein RhoA (EC 3.6.5.2) | Mus musculus (Mouse) | 193 aa |
Protein Details: Q9QUI0 (Rhoa)
Protein Information
| Accession | Q9QUI0 |
|---|---|
| Protein Names | Transforming protein RhoA (EC 3.6.5.2) |
| Gene Symbol | Rhoa |
| Organism | Mus musculus (Mouse) |
| Length | 193 aa |
| Isoforms | No isoforms |
| Related PMIDs | 28526873 29733200 31311849 34200797 35358180 37925639 29217618 (mass) 31311849 (mass) 31772009 (mass) 34884899 (mass) 35358180 (mass) 37925639 (mass) |
| Database Sources | CysModDBdbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MAAIRKKLVI11VGDGACGKTC21LLIVFSKDQF31PEVYVPTVFE41NYVADIEVDG
51-10051KQVELALWDT61AGQEDYDRLR71PLSYPDTDVI81LMCFSIDSPD91SLENIPEKWT
101-150101PEVKHFCPNV111PIILVGNKKD121LRNDEHTRRE131LAKMKQEPVK141PEEGRDMANR
151-193151IGAFGYMECS161AKTKDGVREV171FEMATRAALQ181ARRGKKKSGC191LIL
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 16 | SWISSPALM DBPTM CYSMODDB | Ras family P-loop containing nucleoside triphosphate hydrolase Transforming protein P21 ras signature Small GTPase Small GTPase Rho |
Liver
(28526873)
|
Brain
(35358180)
|
GPS-Palm: 0.89
Deep-Palm: 0.98
|
| 20 | Ras family P-loop containing nucleoside triphosphate hydrolase Transforming protein P21 ras signature Small GTPase Small GTPase Rho |
Brain
(31311849)
|
Brain
(35358180)
Brain
(31311849)
|
Deep-Palm: 0.97
|
|
| 83 | - | - |
Brain
(35358180)
|
Deep-Palm: 0.82
|
|
| 107 | SWISSPALM DBPTM CYSMODDB | Ras family |
Liver
(28526873)
|
Brain
(35358180)
Brain
(31311849)
|
Deep-Palm: 0.97
|
| 159 | SWISSPALM DBPTM CYSMODDB | Ras family |
Liver
(28526873)
|
Brain
(35358180)
|
GPS-Palm: 0.89
Deep-Palm: 0.96
|
| 190 | - | - | - |
GPS-Palm: 0.98
Deep-Palm: 0.06
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.556
5
Brain
Specificity: 0.128
5/5 (100.0%)
4
Liver
Specificity: 0.103
4/4 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
30
Brain tissue (Mass)
Specificity: 0.769
30/56 (53.6%)
Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.