Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| Q9QXE0 | Hacl1 | 2-hydroxyacyl-CoA lyase 1 (EC 4.1.2.63) … | Mus musculus (Mouse) | 581 aa |
Protein Details: Q9QXE0 (Hacl1)
Protein Information
| Accession | Q9QXE0 |
|---|---|
| Protein Names | 2-hydroxyacyl-CoA lyase 1 (EC 4.1.2.63) (2-hydroxyphytanoyl-CoA lyase) (2-HPCL) (Phytanoyl-CoA 2-hydroxylase 2) |
| Gene Symbol | Hacl1 |
| Organism | Mus musculus (Mouse) |
| Length | 581 aa |
| Isoforms | No isoforms |
| Related PMIDs | 28526873 34884899 35477839 37925639 |
| Database Sources | CysModDBdbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MPESNSAEGS11DRSEEQVSGA21KVIAQALKTQ31DVEYMFGVVG41IPVTEIALAA
51-10051QELGIKYIGM61RNEQAACYAA71SAVGYLTGRP81GVCLVVSGPG91LIHALGGMAN
101-150101ANMNCWPLIV111IGGSSERNQE121AMGAFQEFPQ131VEACRLYTKF141SARPSTIELI
151-200151PFIIEKAVRS161SIYGRPGACY171IDIPADFVTL181QANVTSIKYK191ECCMPPPVSM
201-250201AETSAVCAAA211SVLRDAKQPL221LIIGKGAAYS231HAEDSIRKLV241EQCSLPFLPT
251-300251PMGKGVVPDN261HPNCVGAARS271RALQSADVIV281LFGARLNWIL291HFGLPPRYQA
301-350301DVKFIQIDIC311AEELGNNVRP321SVILLGDIDA331VSKQLLEQFD341KTPWQCPPDS
351-400351QWWKTLREKM361KSNEAISKEL371ASQKSLPMNY381YTVFYHVQEQ391LPRDSFIVSE
401-450401GANTMDIGRT411MLQNCLPRHR421LDAGSFGTMG431VGLGFAIAAA441LVAKDRSPGQ
451-500451RVICVEGDSA461FGFSGMEVET471ICRYNLPIIL481LVVNNNGIYQ491GFDADTWEKM
501-550501LHFQEAATTV511PPMCLLPNSH521YEQVMTAFGG531KGYFVRTPEE541LQHSLRQALQ
551-581551DTSKPCLLNI561MIEPQSTRKA571QDFHWLTRSN581M
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 67 | - | - | - |
Deep-Palm: 0.94
|
|
| 83 | - | - | - |
Deep-Palm: 0.97
|
|
| 105 | - | - | - |
Deep-Palm: 0.57
|
|
| 134 | SWISSPALM DBPTM CYSMODDB | - |
Liver
(28526873)
| - |
Deep-Palm: 0.92
|
| 169 | - | - | - |
Deep-Palm: 0.88
|
|
| 192 | - | - | - |
Deep-Palm: 0.23
|
|
| 193 | - | - | - |
Deep-Palm: 0.29
|
|
| 207 | - | - | - |
Deep-Palm: 0.97
|
|
| 243 | SWISSPALM DBPTM CYSMODDB | Thiamine pyrophosphate enzyme central domain |
Liver
(28526873)
| - |
Deep-Palm: 0.96
|
| 264 | SWISSPALM DBPTM CYSMODDB | Thiamine pyrophosphate enzyme central domain |
Liver
(28526873)
| - |
Deep-Palm: 0.92
|
| 310 | - | - | - |
Deep-Palm: 0.93
|
|
| 346 | - | - | - |
Deep-Palm: 0.68
|
|
| 415 | SWISSPALM DBPTM CYSMODDB | - |
Liver
(28526873)
| - |
GPS-Palm: 0.92
Deep-Palm: 0.83
|
| 454 | - | - | - |
Deep-Palm: 0.97
|
|
| 472 | - | - | - |
Deep-Palm: 0.85
|
|
| 514 | - | - | - |
Deep-Palm: 0.35
|
|
| 556 | SWISSPALM DBPTM CYSMODDB | - |
Liver
(28526873)
| - |
Deep-Palm: 0.97
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.714
5
Liver
Specificity: 0.714
5/5 (100.0%)
2
Testis
Specificity: 0.286
2/2 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.000Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.