Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| Q9QXJ1 | Apbb1 | Amyloid beta precursor protein binding … | Mus musculus (Mouse) | 710 aa |
Protein Details: Q9QXJ1 (Apbb1)
Protein Information
| Accession | Q9QXJ1 |
|---|---|
| Protein Names | Amyloid beta precursor protein binding family B member 1 (Amyloid-beta A4 precursor protein-binding family B member 1) (Protein Fe65) |
| Gene Symbol | Apbb1 |
| Organism | Mus musculus (Mouse) |
| Length | 710 aa |
| Isoforms | No isoforms |
| Related PMIDs | 34200797 |
| Database Sources | SwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MSVPSSLSQS11AINANSHGGP21ALSFPLPLHA31AHNQLLNAKL41QATAVVPKDL
51-10051RSAMGEGSVP61EPGPANAKWL71KEGQNQLRRA81ATAHRDQNRN91VTLTLAEEAS
101-150101QEAETAPLGP111KGLMHLYSEL121ELSAHNAANR131GLHGSALIIN141TQEQGPDEGE
151-200151EKAAGEAEED161DEDEEEEEEE171EDLSSPPGLP181EPLENVEVPS191GPQALTDGPR
201-250201EHSKSASLLF211GMRNSAASDE221DSSWATLSQG231SPSYGSPEDT241DSFWNPNAFE
251-300251TDSDLPAGWM261RVQDTSGTYY271WHIPTGTTQW281EPPGRASPSQ291GSSPQEESQL
301-350301TWTGFAHQEG311FEEGEFWKDE321PSEEAPMELG331LKDPEEATLS341FPAQSLSPEP
351-400351VPQEEEKLSQ361RNANPGIKCF371AVRSLGWVEM381TEEELAPGRS391SVAVNNCIRQ
401-450401LSYHKNNLHD411PMAGGWGEGK421DLLLQLEDET431LKLVEPQNQT441LLHAQPIVSI
451-500451RVWGVGRDSG461SNRDFAYVAR471DKLTQMLKCH481VFRCEAPAKN491IATSLHEICS
501-550501KIMSERRNAR511CLVNGLSLDH521SKLVDVPFQV531EFPAPKNELV541QKFQVYYLGN
551-600551VPVAKPVGVD561VINGALESVL571SSSSREQWTP581SHVSVAPATL591TILHQQTEAV
601-650601LGECRVRFLS611FLAVGRDVHT621FAFIMAAGPA631SFCCHMFWCE641PNAASLSEAV
651-700651QAACMLRYQK661CLDARSQTST671SCLPAPPAES681VARRVGWTVR691RGVQSLWGSL
701-710701KPKRLGSQTP
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 369 | - | - | - |
Deep-Palm: 0.87
|
|
| 397 | - | - | - |
Deep-Palm: 0.43
|
|
| 479 | - | - | - |
Deep-Palm: 0.61
|
|
| 484 | - | - | - |
Deep-Palm: 0.47
|
|
| 499 | - | - | - |
Deep-Palm: 0.61
|
|
| 511 | - | - | - |
Deep-Palm: 0.66
|
|
| 604 | - | - | - |
Deep-Palm: 0.82
|
|
| 633 | - | - | - |
Deep-Palm: 0.03
|
|
| 634 | - | - | - |
Deep-Palm: 0.04
|
|
| 639 | - | - | - |
Deep-Palm: 0.07
|
|
| 654 | - |
Brain
(34200797)
| - |
Deep-Palm: 0.91
|
|
| 661 | - | - | - |
Deep-Palm: 0.85
|
|
| 672 | - |
Brain
(34200797)
| - |
Deep-Palm: 0.93
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
2
Brain
Specificity: 1.000
2/2 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.000Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.