Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| Q9QYA2 | Tomm40 | Mitochondrial import receptor subunit TOM40 … | Mus musculus (Mouse) | 361 aa |
Protein Details: Q9QYA2 (Tomm40)
Protein Information
| Accession | Q9QYA2 |
|---|---|
| Protein Names | Mitochondrial import receptor subunit TOM40 homolog (Mitochondrial outer membrane protein of 35 kDa) (MOM35) (Protein Haymaker) (Translocase of outer membrane 40 kDa subunit homolog) |
| Gene Symbol | Tomm40 |
| Organism | Mus musculus (Mouse) |
| Length | 361 aa |
| Isoforms | No isoforms |
| Related PMIDs | 29660268 29733200 34200797 34884899 35477839 37925639 29217618 (mass) 31311849 (mass) 31772009 (mass) 34884899 (mass) 35358180 (mass) 37925639 (mass) |
| Database Sources | CysModDBdbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MGNVLAASSP11PAGPPPPPTP21SLVGLPPPPP31SPPGFTLPPL41GGGLGTGSST
51-10051GRGSERTPGA61AASGAAAASE71DGSCGCLPNP81GTFEECHRKC91KELFPVQMEG
101-150101VKLTVNKGLS111NRFQVTHTVA121LGTIGESNYH131FGVTYVGTKQ141LSPTEAFPVL
151-200151VGDMDNSGSL161NAQVIHQLSP171GLRSKMAIQT181QQSKFVNWQV191DGEYRGSDFT
201-250201AAVTLGNPDV211LVGSGILVAH221YLQSITPCLA231LGGELVYHRR241PGEEGTVMSL
251-300251AGKYTLNNWL261ATVTLGQAGM271HATYYHKASD281QLQVGVEFEA291STRMQDTSAS
301-350301FGYQLDLPKA311NFLFKGSVNS321NWIVGATLEK331KLPPLPLTLS341LCAFLNHRKN
351-361351KFLCGFGLTI361G
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 74 | - | - | - |
Deep-Palm: 0.96
|
|
| 76 | SWISSPALM DBPTM CYSMODDB | - |
Forebrain
(28680068)
| - |
Deep-Palm: 0.89
|
| 86 | - | - | - |
Deep-Palm: 0.11
|
|
| 90 | - | - | - |
Deep-Palm: 0.59
|
|
| 228 | - | - | - |
Deep-Palm: 0.97
|
|
| 342 | - | - | - |
GPS-Palm: 0.93
Deep-Palm: 0.98
|
|
| 354 | - | - |
Brain
(35358180)
|
GPS-Palm: 0.91
Deep-Palm: 0.04
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.444
4
Brain
Specificity: 0.222
4/4 (100.0%)
3
Liver
Specificity: 0.167
3/3 (100.0%)
2
Testis
Specificity: 0.111
2/2 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
9
Brain tissue (Mass)
Specificity: 0.500
9/56 (16.1%)
Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.