Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| Q9QYB1 | Clic4 | Chloride intracellular channel protein 4 … | Mus musculus (Mouse) | 253 aa |
Protein Details: Q9QYB1 (Clic4)
Protein Information
| Accession | Q9QYB1 |
|---|---|
| Protein Names | Chloride intracellular channel protein 4 (mc3s5/mtCLIC) (Glutaredoxin-like oxidoreductase CLIC4) (EC 1.8.-.-) |
| Gene Symbol | Clic4 |
| Organism | Mus musculus (Mouse) |
| Length | 253 aa |
| Isoforms | No isoforms |
| Related PMIDs | 28526873 34884899 35477839 37925639 29217618 (mass) 31311849 (mass) 31772009 (mass) 34884899 (mass) 35358180 (mass) 37925639 (mass) |
| Database Sources | dbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MALSMPLNGL11KEEDKEPLIE21LFVKAGSDGE31SIGNCPFSQR41LFMILWLKGV
51-10051VFSVTTVDLK61RKPADLQNLA71PGTHPPFITF81NSEVKTDVNK91IEEFLEEVLC
101-150101PPKYLKLSPK111HPESNTAGMD121IFAKFSAYIK131NSRPEANEAL141ERGLLKTLQK
151-200151LDEYLNSPLP161DEIDENSMED171IKFSTRRFLD181GDEMTLADCN191LLPKLHIVKV
201-250201VAKKYRNFDI211PKGMTGIWRY221LTNAYSRDEF231TNTCPSDKEV241EIAYSDVAKR
251-253251LTK
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 35 | DBPTM | CLIC, N-terminal domain CLIC-like N-terminal domain Thioredoxin-like superfamily CHLORIDE INTRACELLULAR CHANNEL PROTEIN 6-RELATED Glutaredoxin |
Liver
(28526873)
|
Brain
(35358180)
|
Deep-Palm: 0.81
|
| 100 | - | - | - |
Deep-Palm: 0.95
|
|
| 189 | - | - |
Brain
(35358180)
|
Deep-Palm: 0.98
|
|
| 234 | - | - |
Brain
(35358180)
|
Deep-Palm: 0.28
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.750
6
Liver
Specificity: 0.222
6/6 (100.0%)
2
Testis
Specificity: 0.074
2/2 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.895
17
Brain tissue (Mass)
Specificity: 0.630
17/56 (30.4%)
2
Liver tissue (Mass)
Specificity: 0.074
2/8 (25.0%)
Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.