Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| Q9QYF1 | Rdh11 | Retinol dehydrogenase 11 (EC 1.1.1.300) … | Mus musculus (Mouse) | 316 aa |
Protein Details: Q9QYF1 (Rdh11)
Protein Information
| Accession | Q9QYF1 |
|---|---|
| Protein Names | Retinol dehydrogenase 11 (EC 1.1.1.300) (Androgen-regulated short-chain dehydrogenase/reductase 1) (Cell line MC/9.IL4-derived protein 1) (M42C60) (Prostate short-chain dehydrogenase/reductase 1) (Retinal reductase 1) (RalR1) (Short-chain aldehyde dehydrogenase) (SCALD) |
| Gene Symbol | Rdh11 |
| Organism | Mus musculus (Mouse) |
| Length | 316 aa |
| Isoforms | No isoforms |
| Related PMIDs | 28526873 29733200 34884899 35477839 |
| Database Sources | CysModDBdbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MFGFLLLLSL11PFILYLVTPK21IRKMLSSGVC31TSNVQLPGKV41AIVTGANTGI
51-10051GKETAKDLAQ61RGARVYLACR71DVDKGELAAR81EIQAVTGNSQ91VFVRKLDLAD
101-150101TKSIRAFAKD111FLAEEKHLHL121LINNAGVMMC131PYSKTADGFE141MHIGVNHLGH
151-200151FLLTHLLLEK161LKESAPSRIV171NLSSLGHHLG181RIHFHNLQGE191KFYSAGLAYC
201-250201HSKLANILFT211KELAKRLKGS221GVTTYSVHPG231TVHSELTRYS241SIMRWLWQLF
251-300251FVFIKTPQEG261AQTSLYCALT271EGLESLSGSH281FSDCQLAWVS291YQGRNEIIAR
301-316301RLWDVSCDLL311GLPVDW
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 30 | SWISSPALM DBPTM CYSMODDB | NAD(P)-binding domain superfamily |
Liver
(28526873)
| - |
GPS-Palm: 0.93
Deep-Palm: 0.96
|
| 69 | - | - | - |
Deep-Palm: 0.98
|
|
| 130 | - | - | - |
Deep-Palm: 0.75
|
|
| 200 | - | - | - |
Deep-Palm: 0.96
|
|
| 267 | - | - | - |
Deep-Palm: 0.93
|
|
| 284 | - | - | - |
Deep-Palm: 0.95
|
|
| 307 | - | - | - |
GPS-Palm: 0.93
Deep-Palm: 0.13
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.400
2
Liver
Specificity: 0.400
2/2 (100.0%)
2
Testis
Specificity: 0.400
2/2 (100.0%)
1
Brain
Specificity: 0.200
1/1 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.000Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.