Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| Q9QZE5 | Copg1 | Coatomer subunit gamma-1 (Gamma-1-coat protein) … | Mus musculus (Mouse) | 874 aa |
Protein Details: Q9QZE5 (Copg1)
Protein Information
| Accession | Q9QZE5 |
|---|---|
| Protein Names | Coatomer subunit gamma-1 (Gamma-1-coat protein) (Gamma-1-COP) |
| Gene Symbol | Copg1 |
| Organism | Mus musculus (Mouse) |
| Length | 874 aa |
| Isoforms | No isoforms |
| Related PMIDs | 28526873 29660268 29733200 35477839 37925639 |
| Database Sources | dbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MLKKFDKKDE11ESGGGSNPLQ21HLEKSAVLQE31ARVFNETPIN41PRKCAHILTK
51-10051ILYLINQGEH61LGTTEATEAF71FAMTKLFQSN81DPTLRRMCYL91TIKEMSCIAE
101-150101DVIIVTSSLT111KDMTGKEDNY121RGPAVRALCQ131ITDSTMLQAV141ERYMKQAIVD
151-200151KVPSVSSSAL161VSSLHLLKCS171FDVVKRWVNE181AQEAASSDNI191MVQYHALGLL
201-250201YHVRKNDRLA211VSKMISKFTR221HGLKSPFAYC231MMIRVASKQL241EEEDGSRDSP
251-300251LFDFIESCLR261NKHEMVVYEA271ASAIVNLPGC281SAKELAPAVS291VLQLFCSSPK
301-350301AALRYAAVRT311LNKVAMKHPS321AVTACNLDLE331NLVTDSNRSI341ATLAITTLLK
351-400351TGSESSIDRL361MKQISSFMSE371ISDEFKVVVV381QAISALCQKY391PRKHAVLMNF
401-450401LFTMLREEGG411FEYKRAIVDC421IISIIEENSE431SKETGLSHLC441EFIEDCEFTV
451-500451LATRILHLLG461QEGPKTNNPS471KYIRFIYNRV481VLEHEEVRAG491AVSALAKFGA
501-550501QNEEMLPSIL511VLLKRCVMDD521DNEVRDRATF531YLNVLEQKQK541ALNAGYILNG
551-600551LTVSIPGLEK561ALQQYTLEPS571EKPFDLKSVP581LATTPMAEQR591PESTATAAVK
601-650601QPEKVAATRQ611EIFQEQLAAV621PEFQGLGPLF631KSSPEPVALT641ESETEYVIRC
651-700651TKHTFSDHLV661FQFDCTNTLN671DQTLENVTVQ681MEPTEAYEVL691SYVPARSLPY
701-750701NQPGTCYTLV711ALPTEDPTAV721ACTFSCVMKF731TVKDCDPNTG741EIDEEGYEDE
751-800751YVLEDLEVTV761ADHIQKVMKV771NFEAAWDEVG781DEFEKEETFT791LSTIKTLEEA
801-850801VGNIVKFLGM811HPCERSDKVP821ENKNTHTLLL831AGVFRGGHDI841LVRSRLLLLD
851-874851TVTMQVTARS861SEELPVDIIL871ASVG
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 44 | Armadillo-like helical Coatomer gamma subunit | - | - |
Deep-Palm: 0.62
|
|
| 88 | Adaptin N terminal region |
Liver
(28526873)
| - |
Deep-Palm: 0.75
|
|
| 97 | - | - | - |
Deep-Palm: 0.56
|
|
| 129 | - | - | - |
Deep-Palm: 0.94
|
|
| 169 | - | - | - |
Deep-Palm: 0.96
|
|
| 230 | - | - | - |
GPS-Palm: 0.91
Deep-Palm: 0.81
|
|
| 258 | DBPTM | Adaptin N terminal region |
Liver
(28526873)
| - |
Deep-Palm: 0.79
|
| 280 | - | - | - |
Deep-Palm: 0.96
|
|
| 296 | Adaptin N terminal region |
Liver
(28526873)
| - |
GPS-Palm: 0.91
Deep-Palm: 0.98
|
|
| 325 | - | - | - |
Deep-Palm: 0.93
|
|
| 387 | Adaptin N terminal region |
Liver
(28526873)
| - |
GPS-Palm: 0.94
Deep-Palm: 0.95
|
|
| 420 | - | - |
Liver
(34884899)
|
Deep-Palm: 0.82
|
|
| 440 | - | - | - |
Deep-Palm: 0.84
|
|
| 446 | - | - | - |
Deep-Palm: 0.94
|
|
| 516 | - | - | - |
Deep-Palm: 0.71
|
|
| 650 | - | - | - |
Deep-Palm: 0.16
|
|
| 665 | - | - | - |
Deep-Palm: 0.06
|
|
| 706 | - | - | - |
Deep-Palm: 0.93
|
|
| 722 | - | - | - |
Deep-Palm: 0.74
|
|
| 726 | - | - | - |
Deep-Palm: 0.36
|
|
| 735 | - | - | - |
Deep-Palm: 0.09
|
|
| 813 | - | - | - |
Deep-Palm: 0.76
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.500
4
Liver
Specificity: 0.500
4/4 (100.0%)
2
Brain
Specificity: 0.250
2/2 (100.0%)
2
Testis
Specificity: 0.250
2/2 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.000Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.