Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| Q9QZI8 | Serinc1 | Serine incorporator 1 (Axotomy-induced glyco/Golgi … | Mus musculus (Mouse) | 453 aa |
Protein Details: Q9QZI8 (Serinc1)
Protein Information
| Accession | Q9QZI8 |
|---|---|
| Protein Names | Serine incorporator 1 (Axotomy-induced glyco/Golgi protein 2) (Membrane protein TMS-2) (Tumor differentially expressed protein 1-like) (Tumor differentially expressed protein 2) |
| Gene Symbol | Serinc1 |
| Organism | Mus musculus (Mouse) |
| Length | 453 aa |
| Isoforms | No isoforms |
| Related PMIDs | 28526873 29733200 31772009 34884899 37925639 29217618 (mass) 31311849 (mass) 31772009 (mass) 34884899 (mass) 35358180 (mass) 37925639 (mass) |
| Database Sources | dbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MGSVLGLCSV11ASWIPCLCGS21APCLLCRCCP31SGNNSTVTRL41IYALFLLVGV
51-10051CVACVMLIPG61MEEQLNKIPG71FCENEKGVVP81CNILVGYKAV91YRLCFGLAMF
101-150101YLLLSLLMIK111VKSSSDPRAA121VHNGFWFFKF131ATAVAIIIGA141FFIPEGTFTT
151-200151VWFYVGMAGA161FCFILIQLVL171LIDFAHSWNE181SWVEKMEEGN191SRCWYAALLS
201-250201ATALNYLLSL211VAVVLFFVYY221THPASCAENK231AFISVNMLLC241IGASVMSILP
251-300251KIQESQPRSG261LLQSSVITVY271TMYLTWSAMT281NEPETNCNPS291LLSIIGFNTT
301-350301RPIPKDGQSV311QWWHPQGIIG321LVLFLLCVFY331SSIRTSNNSQ341VNKLTLTSDE
351-400351STLIEDGNGR361SDGSLDDGDG371IHRAVDNERD381GVTYSYSFFH391FMLFLASLYI
401-450401MMTLTNWYRY411EPSREMKSQW421TAVWVKISSS431WIGLVLYVWT441LVAPLVLTNR
451-453451DFD
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 8 | - | - |
Brain
(35358180)
|
Deep-Palm: 0.02
|
|
| 16 | - | - |
Brain
(35358180)
|
Deep-Palm: 0.64
|
|
| 18 | - | - |
Brain
(35358180)
|
Deep-Palm: 0.74
|
|
| 23 | Serine incorporator/TMS membrane protein | - |
Brain
(35358180)
|
Deep-Palm: 0.26
|
|
| 26 | Serine incorporator/TMS membrane protein | - |
Brain
(35358180)
|
Deep-Palm: 0.47
|
|
| 28 | Serine incorporator/TMS membrane protein | - | - |
Deep-Palm: 0.31
|
|
| 29 | Serine incorporator/TMS membrane protein | - | - |
Deep-Palm: 0.59
|
|
| 51 | - | - | - |
Deep-Palm: 0.84
|
|
| 54 | - | - | - |
Deep-Palm: 0.92
|
|
| 72 | Serine incorporator (Serinc) |
Liver
(28526873)
|
Brain
(35358180)
|
Deep-Palm: 0.77
|
|
| 81 | DBPTM | Serine incorporator (Serinc) |
Liver
(28526873)
|
Brain
(35358180)
Brain
(31311849)
|
Deep-Palm: 0.90
|
| 94 | - | - | - |
Deep-Palm: 0.89
|
|
| 162 | - | - | - |
Deep-Palm: 0.09
|
|
| 193 | - | - | - |
Deep-Palm: 0.84
|
|
| 226 | - | - | - |
Deep-Palm: 0.19
|
|
| 240 | - | - | - |
Deep-Palm: 0.71
|
|
| 287 | - | - | - |
Deep-Palm: 0.21
|
|
| 327 | - | - | - |
Deep-Palm: 0.42
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.714
5
Liver
Specificity: 0.208
5/5 (100.0%)
1
Brain
Specificity: 0.042
1/1 (100.0%)
1
NSC
Specificity: 0.042
1/1 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
17
Brain tissue (Mass)
Specificity: 0.708
17/56 (30.4%)
Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.