Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| Q9R0A1 | Clcn2 | Chloride channel protein 2 (ClC-2) | Mus musculus (Mouse) | 908 aa |
Protein Details: Q9R0A1 (Clcn2)
Protein Information
| Accession | Q9R0A1 |
|---|---|
| Protein Names | Chloride channel protein 2 (ClC-2) |
| Gene Symbol | Clcn2 |
| Organism | Mus musculus (Mouse) |
| Length | 908 aa |
| Isoforms | No isoforms |
| Related PMIDs | 34200797 35477839 37925639 |
| Database Sources | CysModDBdbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MAAATAAAAA11AAAAGEGMEP21RALQYEQTLM31YGRYTQELGA41FAKEEAARIR
51-10051LGGPEPWKGS61PSARATPELL71EYGQSRCARC81RICSVRCHKF91LVSRVGEDWI
101-150101FLVLLGLLMA111LVSWAMDYAI121AVCLQAQQWM131SRGLNTNILL141QYLAWVTYPV
151-200151VLITFSAGFT161QILAPQAVGS171GIPEMKTILR181GVVLKEYLTL191KTFVAKVIGL
201-250201TCALGSGMPL211GKEGPFVHIA221SMCAALLSKF231LSLFGGIYEH241ESRNTEMLAA
251-300251ACAVGVGCCF261AAPIGGVLFS271IEVTSTFFAV281RNYWRGFFAA291TFSAFIFRVL
301-350301AVWNRDEETI311TALFKTRFRL321DFPFDLQELP331AFAVIGIASG341FGGALFVYLN
351-400351RKIVQVMRKQ361KTINRFLMRK371RLLFPALVTL381LISTLTFPPG391FGQFMAGQLS
401-450401QKETLVTLFD411NRTWVRQGLV421EDLELPSTSQ431AWSPPRANVF441LTLVIFILMK
451-500451FWMSALATTI461PVPCGAFMPV471FVIGAAFGRL481VGESMAAWFP491DGIHTDSSTY
501-550501RIVPGGYAVV511GAAALAGAVT521HTVSTAVIVF531ELTGQIAHIL541PVMIAVILAN
551-600551AVAQSLQPSL561YDSIIRIKKL571PYLPELGWGR581HQQYRVRVED591IMVRDVPHVA
601-650601LSCTFRDLRL611ALHRTKGRML621ALVESPESMI631LLGSIERSQV641VALLGAQLSP
651-700651ARRRQHMQKL661RKAQLSPPSD671QESPPSSETS681IRFQVNTEDS691GFSGAHGQTH
701-750701KPLKPALKRG711PSNSTSLQEG721TTGNMESAGI731ALRSLFCGSP741PLEATSELEK
751-800751SESCDKRKLK761RVRISLASDS771DPEAEMSPEE781ILEWEEQQLD791EPVNFSDCKI
801-850801DPAPFQLVER811TSLHKTHTIF821SLLGVDHAYV831TSIGRLIGIV841TLKELRKAIE
851-900851GSVTAQGVKV861RPPLASFRDS871ATSSSDTETT881EVHALWGPRS891RHGLPREGTP
901-908901SDSDDKCQ
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 77 | - | - | - |
Deep-Palm: 0.68
|
|
| 80 | - | - | - |
Deep-Palm: 0.77
|
|
| 83 | - | - | - |
Deep-Palm: 0.74
|
|
| 87 | - | - | - |
Deep-Palm: 0.46
|
|
| 123 | - | - | - |
Deep-Palm: 0.48
|
|
| 202 | - | - | - |
Deep-Palm: 0.97
|
|
| 223 | - | - | - |
Deep-Palm: 0.81
|
|
| 252 | - | - | - |
Deep-Palm: 0.59
|
|
| 258 | - | - | - |
Deep-Palm: 0.73
|
|
| 259 | - | - | - |
Deep-Palm: 0.81
|
|
| 464 | - | - | - |
Deep-Palm: 0.55
|
|
| 603 | - | - | - |
Deep-Palm: 0.96
|
|
| 737 | SWISSPALM DBPTM CYSMODDB | - |
Forebrain
(28680068)
| - |
Deep-Palm: 0.97
|
| 754 | - | - | - |
Deep-Palm: 0.97
|
|
| 798 | - | - | - |
Deep-Palm: 0.58
|
|
| 907 | - | - | - |
GPS-Palm: 0.89
Deep-Palm: 0.03
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.500
3
Liver
Specificity: 0.500
3/3 (100.0%)
2
Testis
Specificity: 0.333
2/2 (100.0%)
1
Brain
Specificity: 0.167
1/1 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.000Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.