Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| Q9R0M4 | Podxl | Podocalyxin (Podocalyxin-like protein 1) (PC) … | Mus musculus (Mouse) | 503 aa |
Protein Details: Q9R0M4 (Podxl)
Protein Information
| Accession | Q9R0M4 |
|---|---|
| Protein Names | Podocalyxin (Podocalyxin-like protein 1) (PC) (PCLP-1) |
| Gene Symbol | Podxl |
| Organism | Mus musculus (Mouse) |
| Length | 503 aa |
| Isoforms | No isoforms |
| Related PMIDs | 34884899 |
| Database Sources | CysModDBdbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MPPTTALSAL11LLLLLSPASH21SHNGNETSTS31AIKSSTVQSH41QSATTSTEVT
51-10051TGHPVASTLA61STQPSNPTPF71TTSTQSPSMP81TSTPNPTSNQ91SGGNLTSSVS
101-150101EVDKTKTSSP111SSTAFTSSSG121QTASSGGKSG131DSFTTAPTTT141LGLINVSSQP
151-200151TDLNTTSKLL161STPTTDNTTS171PQQPVDSSPS181TASHPVGQHT191PAAVPSSSGS
201-250201TPSTDNSTLT211WKPTTHKPLG221TSEATQPLTS231QTPGITTLPV241STLQQSMAST
251-300251VGTTTEEFTH261LISNGTPVAP271PGPSTPSPIW281AFGNYQLNCE291PPIRPDEELL
301-350301ILNLTRASLC311ERSPLDEKEK321LVELLCHSVK331ASFKPAEDLC341TLHVAPILDN
351-400351QAVAVKRIII361ETKLSPKAVY371ELLKDRWDDL381TEAGVSDMKL391GKEGPPEVNE
401-450401DRFSLPLIIT411IVCMASFLLL421VAALYGCCHQ431RISQRKDQQR441LTEELQTVEN
451-500451GYHDNPTLEV461METPSEMQEK471KVVNLNGELG481DSWIVPLDNL491TKDDLDEEED
501-503501THL
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 289 | - | - | - |
Deep-Palm: 0.67
|
|
| 310 | - | - | - |
GPS-Palm: 0.91
Deep-Palm: 0.98
|
|
| 326 | - | - | - |
Deep-Palm: 0.98
|
|
| 340 | SWISSPALM DBPTM CYSMODDB | CD34/Podocalyxin family |
Forebrain
(28680068)
| - |
Deep-Palm: 0.91
|
| 413 | - | - | - |
Deep-Palm: 0.75
|
|
| 427 | - | - | - |
GPS-Palm: 0.96
Deep-Palm: 0.97
|
|
| 428 | - | - | - |
GPS-Palm: 0.95
Deep-Palm: 0.98
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
1
Liver
Specificity: 1.000
1/1 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.000Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.