Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| Q9R1P4 | Psma1 | Proteasome subunit alpha type-1 (Macropain … | Mus musculus (Mouse) | 263 aa |
Protein Details: Q9R1P4 (Psma1)
Protein Information
| Accession | Q9R1P4 |
|---|---|
| Protein Names | Proteasome subunit alpha type-1 (Macropain subunit C2) (Multicatalytic endopeptidase complex subunit C2) (Proteasome component C2) (Proteasome nu chain) (Proteasome subunit alpha-6) (alpha-6) |
| Gene Symbol | Psma1 |
| Organism | Mus musculus (Mouse) |
| Length | 263 aa |
| Isoforms | No isoforms |
| Related PMIDs | 28526873 29733200 34884899 37925639 29217618 (mass) 31311849 (mass) 31772009 (mass) 34884899 (mass) 35358180 (mass) 37925639 (mass) |
| Database Sources | CysModDBdbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MFRNQYDNDV11TVWSPQGRIH21QIEYAMEAVK31QGSATVGLKS41KTHAVLVALK
51-10051RAQSELAAHQ61KKILHVDNHI71GISIAGLTAD81ARLLCNFMRQ91ECLDSRFVFD
101-150101RPLPVSRLVS111LIGSKTQIPT121QRYGRRPYGV131GLLIAGYDDM141GPHIFQTCPS
151-200151ANYFDCRAMS161IGARSQSART171YLERHMSEFM181ECNLDELVKH191GLRALRETLP
201-250201AEQDLTTKNV211SIGIVGKDLE221FTIYDDDDVS231PFLDGLEERP241QRKAQPSQAA
251-263251EEPAEKADEP261MEH
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 85 | SWISSPALM DBPTM CYSMODDB | Proteasome subunit |
Liver
(28526873)
|
Brain
(35358180)
|
Deep-Palm: 0.97
|
| 92 | - | - | - |
Deep-Palm: 0.96
|
|
| 148 | - | - | - |
Deep-Palm: 0.14
|
|
| 156 | - | - | - |
Deep-Palm: 0.26
|
|
| 182 | SWISSPALM DBPTM CYSMODDB | Proteasome subunit |
Forebrain
(28680068)
|
Liver
(34884899)
|
Deep-Palm: 0.97
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.857
6
Liver
Specificity: 0.462
6/6 (100.0%)
1
Brain
Specificity: 0.077
1/1 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
6
Brain tissue (Mass)
Specificity: 0.462
6/56 (10.7%)
Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.