Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| Q9UNM6 | PSMD13 | 26S proteasome non-ATPase regulatory subunit … | Homo sapiens (Human) | 376 aa |
Protein Details: Q9UNM6 (PSMD13)
Protein Information
| Accession | Q9UNM6 |
|---|---|
| Protein Names | 26S proteasome non-ATPase regulatory subunit 13 (26S proteasome regulatory subunit RPN9) (26S proteasome regulatory subunit S11) (26S proteasome regulatory subunit p40.5) |
| Gene Symbol | PSMD13 |
| Organism | Homo sapiens (Human) |
| Length | 376 aa |
| Isoforms | No isoforms |
| Related PMIDs | 26111759 29733200 |
| Database Sources | SwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MKDVPGFLQQ11SQNSGPGQPA21VWHRLEELYT31KKLWHQLTLQ41VLDFVQDPCF
51-10051AQGDGLIKLY61ENFISEFEHR71VNPLSLVEII81LHVVRQMTDP91NVALTFLEKT
101-150101REKVKSSDEA111VILCKTAIGA121LKLNIGDLQV131TKETIEDVEE141MLNNLPGVTS
151-200151VHSRFYDLSS161KYYQTIGNHA171SYYKDALRFL181GCVDIKDLPV191SEQQERAFTL
201-250201GLAGLLGEGV211FNFGELLMHP221VLESLRNTDR231QWLIDTLYAF241NSGNVERFQT
251-300251LKTAWGQQPD261LAANEAQLLR271KIQLLCLMEM281TFTRPANHRQ291LTFEEIAKSA
301-350301KITVNEVELL311VMKALSVGLV321KGSIDEVDKR331VHMTWVQPRV341LDLQQIKGMK
351-376351DRLEFWCTDV361KSMEMLVEHQ371AHDILT
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 49 | 26S Proteasome non-ATPase regulatory subunit 13 PSD13, N-terminal | - | - |
GPS-Palm: 0.71
Deep-Palm: 0.51
|
|
| 114 | - | - | - |
GPS-Palm: 0.89
Deep-Palm: 0.97
|
|
| 182 | - | - | - |
GPS-Palm: 0.75
Deep-Palm: 0.93
|
|
| 276 | - | - | - |
GPS-Palm: 0.73
Deep-Palm: 0.83
|
|
| 357 | - | - | - |
Deep-Palm: 0.43
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.400
2
HAP1 cell
Specificity: 0.400
2/2 (100.0%)
2
Primary T cell
Specificity: 0.400
2/2 (100.0%)
1
293T cell
Specificity: 0.200
1/1 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.000Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.