Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| Q9UQV4 | LAMP3 | Lysosome-associated membrane glycoprotein 3 (LAMP-3) … | Homo sapiens (Human) | 416 aa |
Protein Details: Q9UQV4 (LAMP3)
Protein Information
| Accession | Q9UQV4 |
|---|---|
| Protein Names | Lysosome-associated membrane glycoprotein 3 (LAMP-3) (Lysosomal-associated membrane protein 3) (DC-lysosome-associated membrane glycoprotein) (DC LAMP) (Protein TSC403) (CD antigen CD208) |
| Gene Symbol | LAMP3 |
| Organism | Homo sapiens (Human) |
| Length | 416 aa |
| Isoforms | No isoforms |
| Related PMIDs | No related PMIDs |
| Database Sources | CysModDBdbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MPRQLSAAAA11LFASLAVILH21DGSQMRAKAF31PETRDYSQPT41AAATVQDIKK
51-10051PVQQPAKQAP61HQTLAARFMD71GHITFQTAAT81VKIPTTTPAT91TKNTATTSPI
101-150101TYTLVTTQAT111PNNSHTAPPV121TEVTVGPSLA131PYSLPPTITP141PAHTTGTSSS
151-200151TVSHTTGNTT161QPSNQTTLPA171TLSIALHKST181TGQKPVQPTH191APGTTAAAHN
201-250201TTRTAAPAST211VPGPTLAPQP221SSVKTGIYQV231LNGSRLCIKA241EMGIQLIVQD
251-300251KESVFSPRRY261FNIDPNATQA271SGNCGTRKSN281LLLNFQGGFV291NLTFTKDEES
301-350301YYISEVGAYL311TVSDPETIYQ321GIKHAVVMFQ331TAVGHSFKCV341SEQSLQLSAH
351-400351LQVKTTDVQL361QAFDFEDDHF371GNVDECSSDY381TIVLPVIGAI391VVGLCLMGMG
401-416401VYKIRLRCQS411SGYQRI
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 237 | - | - | - |
GPS-Palm: 0.74
Deep-Palm: 0.80
|
|
| 274 | - | - | - |
GPS-Palm: 0.76
Deep-Palm: 0.78
|
|
| 339 | - | - | - |
Deep-Palm: 0.63
|
|
| 376 | - | - | - |
Deep-Palm: 0.13
|
|
| 395 | - | - | - |
GPS-Palm: 0.84
Deep-Palm: 0.94
|
|
| 408 | SWISSPALM DBPTM CYSMODDB | - | - | - |
GPS-Palm: 0.91
Deep-Palm: 0.04
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Conservation score for cysteine
PhyloP for Cysteine
PhastCons Conservation Scores for Cysteine
TCGA Cysteine Mutation Information
Note: Mutations indicate amino acid changes that may create potential palmitoylation sites.
| Position | Amino Acid Change | Frequency | Type | Function | Cancer Type |
|---|---|---|---|---|---|
| 36 | Y → C | 0.002288 | SNP | Missense Mutation | STAD |
| 237 | C → C | 0.002976 | SNP | Silent | KIRC |
| 376 | C → C | 0.001887 | SNP | Silent | UCEC |
| 405 | R → C | 0.002141 | SNP | Missense Mutation | SKCM |
| 411 | S → C | 0.001969 | SNP | Missense Mutation | HNSC |