Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| Q9WTR1 | Trpv2 | Transient receptor potential cation channel … | Mus musculus (Mouse) | 756 aa |
Protein Details: Q9WTR1 (Trpv2)
Protein Information
| Accession | Q9WTR1 |
|---|---|
| Protein Names | Transient receptor potential cation channel subfamily V member 2 (TrpV2) (Growth factor-regulated calcium channel) (GRC) (Osm-9-like TRP channel 2) (OTRPC2) |
| Gene Symbol | Trpv2 |
| Organism | Mus musculus (Mouse) |
| Length | 756 aa |
| Isoforms | No isoforms |
| Related PMIDs | 29217618 29733200 35358180 37925639 29217618 (mass) 31311849 (mass) 31772009 (mass) 34884899 (mass) 35358180 (mass) 37925639 (mass) |
| Database Sources | CysModDBdbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MTSASNPPAF11RLETSDGDEE21GSAEVNKGKN31EPPPMESPFQ41GEDRNFSPQI
51-10051KVNLNYRKGL61GPSQQDPNRF71DRDRLFSVVS81RGVPEELTGL91LEYLRRTSKY
101-150101LTDSAYTEGS111TGKTCLMKAV121LNLQDGVNAC131ILPLLQIDRD141SGNPQPLVNA
151-200151QCTDEFYRGH161SALHIAIEKR171SLWCVKLLVE181NGANVHIRAC191GRFFQKHQGT
201-250201CFYFGELPLS211LAACTKQWDV221VTYLLENPHQ231PASLEATDSL241GNTVLHALVM
251-300251IADNSPENSA261LVIHMYDSLL271QMGARLCPTV281QLEDICNHQG291LTPLKLAAKE
301-350301GKIEIFRHIL311QREFSGLYQP321LSRKFTEWCY331GPVRVSLYDL341SSVDSWEKNS
351-400351VLEIIAFHCK361SPHRHRMVVL371EPLNKLLQEK381WDRLIPRFFF391NFACYLVYMI
401-450401IFTIVAYHQP411SLEQPAIPSS421KATFGDSMLL431LGHILILLGG441IYLLLGQLWY
451-500451FWRRRLFIWI461SFMDSYFEIL471FLVQALLTVL481SQVLRFVETE491WYLPLLVSSL
501-550501VLGWLNLLYY511TRGFQHTGIY521SVMIQKVILR531DLLRFLLVYL541VFLFGFAVAL
551-600551VSLSREARSP561KAPEDSNTTV571TEKPTLGQEE581EPVPYGGILD591ASLELFKFTI
601-650601GMGELAFQEQ611LRFRGVVLLL621LLAYVLLTYV631LLLNMLIALM641SETVNSVATD
651-700651SWSIWKLQKA661ISVLEMENGY671WWCRRKRHRA681GRLLKVGTKG691DGIPDERWCF
701-750701RVEEVNWAAW711EKTLPTLSED721PSGAGITGYK731KNPTSKPGKN741SASEEDHLPL
751-756751QVLQSH
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 115 | - | - | - |
Deep-Palm: 0.86
|
|
| 130 | - | - | - |
GPS-Palm: 0.93
Deep-Palm: 0.85
|
|
| 152 | - | - | - |
Deep-Palm: 0.67
|
|
| 174 | - | - | - |
Deep-Palm: 0.90
|
|
| 190 | - | - | - |
Deep-Palm: 0.85
|
|
| 201 | - | - | - |
Deep-Palm: 0.77
|
|
| 214 | - | - | - |
Deep-Palm: 0.84
|
|
| 277 | - | - | - |
Deep-Palm: 0.42
|
|
| 286 | - | - | - |
Deep-Palm: 0.97
|
|
| 329 | - | - | - |
Deep-Palm: 0.90
|
|
| 359 | - | - | - |
Deep-Palm: 0.57
|
|
| 394 | - | - | - |
Deep-Palm: 0.04
|
|
| 673 | SWISSPALM DBPTM CYSMODDB | - |
Forebrain
(28680068)
| - |
Deep-Palm: 0.93
|
| 699 | - | - | - |
Deep-Palm: 0.81
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.500
2
Brain
Specificity: 0.286
2/2 (100.0%)
1
Raw 264.7
Specificity: 0.143
1/1 (100.0%)
1
Liver
Specificity: 0.143
1/1 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
3
Brain tissue (Mass)
Specificity: 0.429
3/56 (5.4%)
Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.