Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| Q9WU60 | Atrn | Attractin (Protein mahogany) | Mus musculus (Mouse) | 1428 aa |
Protein Details: Q9WU60 (Atrn)
Protein Information
| Accession | Q9WU60 |
|---|---|
| Protein Names | Attractin (Protein mahogany) |
| Gene Symbol | Atrn |
| Organism | Mus musculus (Mouse) |
| Length | 1428 aa |
| Isoforms | No isoforms |
| Related PMIDs | 29217618 31772009 37925639 29217618 (mass) 31311849 (mass) 31772009 (mass) 34884899 (mass) 35358180 (mass) 37925639 (mass) |
| Database Sources | CysModDBdbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MVAVAAAAAT11EARLRGSTTA21TAAPAGRKGR31QHRPCTATGA41WRPGPRARLC
51-10051LPRVLSRALP61PPPLLPLLFS71LLLLPLPREA81EAAAVAAAVS91GSAAAEAKEC
101-150101DRPCVNGGRC111NPGTGQCVCP121TGWVGEQCQH131CGGRFRLTGS141SGFVTDGPGN
151-200151YKYKTKCTWL161IEGQPNRIMR171LRFNHFATEC181SWDHLYVYDG191DSIYAPLIAA
201-250201FSGLIVPERD211GNETAPEVTV221TSGYALLHFF231SDAAYNLTGF241NITYNFDMCP
251-300251NNCSGRGECK261SSNSSSAVEC271ECSENWKGES281CDIPHCTDNC291GFPHRGICNA
301-350301SDTRGCSCFP311HWQGPGCSIP321VPANQSFWTR331EEYSDLKLPR341ASHKAVVNGN
351-400351IMWVVGGYMF361NHSDYSMVLA371YDLTSREWLP381LNHSVNSVVV391RYGHSLALHK
401-450401DKIYMYGGKI411DSTGNVTNEL421RVFHIHNESW431VLLTPKAKDQ441YAVVGHSAHI
451-500451VTLASGRVVM461LVIFGHCPLY471GYISVVQEYD481LEKNTWSILH491TQGALVQGGY
501-550501GHSSVYDDRT511KALYVHGGYK521AFSANKYRLA531DDLYRYDVDT541QMWTILKDSR
551-600551FFRYLHTAVI561VSGTMLVFGG571NTHNDTSMSH581GAKCFSSDFM591AYDIACDRWS
601-650601VLPRPELHHD611VNRFGHSAVL621YNSTMYVFGG631FNSLLLSDVL641VFTSEQCDAH
651-700651RSEAACVAAG661PGIRCLWDTQ671SSRCTSWELA681TEEQAEKLKS691ECFSKRTLDH
701-750701DRCDQHTDCY711SCTANTNDCH721WCNDHCVPVN731HSCTEGQISI741AKYESCPKDN
751-800751PMYYCNKKTS761CRSCALDQNC771QWEPRNQECI781ALPENICGNG791WHLVGNSCLK
801-850801ITTAKENYDN811AKLSCRNHNA821FLASLTSQKK831VEFVLKQLRL841MQSSQSMSKL
851-900851TLTPWVGLRK861INVSYWCWED871MSPFTNSLLQ881WMPSEPSDAG891FCGILSEPST
901-950901RGLKAATCIN911PLNGSVCERP921ANHSAKQCRT931PCALRTACGE941CTSSSSECMW
951-1000951CSNMKQCVDS961NAYVASFPFG971QCMEWYTMSS981CPPENCSGYC991TCSHCLEQPG
1001-10501001CGWCTDPSNT1011GKGKCIEGSY1021KGPVKMPSQA1031SAGNVYPQPL1041LNSSMCLEDS
1051-11001051RYNWSFIHCP1061ACQCNGHSKC1071INQSICEKCE1081DLTTGKHCET1091CISGFYGDPT
1101-11501101NGGKCQPCKC1111NGHASLCNTN1121TGKCFCTTKG1131VKGDECQLCE1141VENRYQGNPL
1151-12001151KGTCYYTLLI1161DYQFTFSLSQ1171EDDRYYTAIN1181FVATPDEQNR1191DLDMFINASK
1201-12501201NFNLNITWAT1211SFPAGTQTGE1221EVPVVSKTNI1231KEYKDSFSNE1241KFDFRNHPNI
1251-13001251TFFVYVSNFT1261WPIKIQIAFS1271QHSNFMDLVQ1281FFVTFFSCFL1291SLLLVAAVVW
1301-13501301KIKQSCWASR1311RREQLLREMQ1321QMASRPFASV1331NVALETDEEP1341PDLIGGSIKT
1351-14001351VPKPIALEPC1361FGNKAAVLSV1371FVRLPRGLGG1381IPPPGQSGLA1391VASALVDISQ
1401-14281401QMPIVYKEKS1411GAVRNRKQQP1421PAQPGTCI
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 35 | - | - | - |
Deep-Palm: 0.85
|
|
| 50 | - | - | - |
GPS-Palm: 0.90
Deep-Palm: 0.98
|
|
| 100 | - | - | - |
Deep-Palm: 0.45
|
|
| 104 | - | - | - |
Deep-Palm: 0.11
|
|
| 110 | - | - | - |
Deep-Palm: 0.03
|
|
| 117 | - | - | - |
Deep-Palm: 0.02
|
|
| 119 | - | - | - |
Deep-Palm: 0.02
|
|
| 128 | - | - | - |
Deep-Palm: 0.10
|
|
| 131 | - | - | - |
Deep-Palm: 0.07
|
|
| 157 | - | - | - |
Deep-Palm: 0.18
|
|
| 180 | - | - | - |
Deep-Palm: 0.04
|
|
| 249 | - | - | - |
Deep-Palm: 0.01
|
|
| 253 | - | - | - |
Deep-Palm: 0.02
|
|
| 259 | - | - | - |
Deep-Palm: 0.02
|
|
| 270 | - | - | - |
Deep-Palm: 0.03
|
|
| 272 | - | - | - |
Deep-Palm: 0.02
|
|
| 281 | - | - | - |
Deep-Palm: 0.01
|
|
| 286 | - | - | - |
Deep-Palm: 0.02
|
|
| 290 | - | - | - |
Deep-Palm: 0.02
|
|
| 298 | - | - | - |
Deep-Palm: 0.01
|
|
| 306 | - | - | - |
Deep-Palm: 0.02
|
|
| 308 | - | - | - |
Deep-Palm: 0.02
|
|
| 317 | - | - | - |
Deep-Palm: 0.05
|
|
| 467 | - | - | - |
Deep-Palm: 0.94
|
|
| 584 | - | - | - |
Deep-Palm: 0.03
|
|
| 596 | - | - | - |
Deep-Palm: 0.11
|
|
| 647 | - | - | - |
Deep-Palm: 0.96
|
|
| 656 | - | - |
Brain
(35358180)
|
Deep-Palm: 0.46
|
|
| 665 | - | - | - |
Deep-Palm: 0.73
|
|
| 674 | - | - | - |
Deep-Palm: 0.89
|
|
| 692 | - | - | - |
Deep-Palm: 0.69
|
|
| 703 | - | - | - |
Deep-Palm: 0.03
|
|
| 709 | - | - | - |
Deep-Palm: 0.01
|
|
| 712 | - | - | - |
Deep-Palm: 0.01
|
|
| 719 | - | - | - |
Deep-Palm: 0.01
|
|
| 722 | - | - | - |
Deep-Palm: 0.01
|
|
| 726 | - | - | - |
Deep-Palm: 0.01
|
|
| 733 | - | - | - |
Deep-Palm: 0.01
|
|
| 746 | - | - | - |
Deep-Palm: 0.03
|
|
| 755 | - | - | - |
Deep-Palm: 0.04
|
|
| 761 | - | - | - |
Deep-Palm: 0.02
|
|
| 764 | - | - |
Brain
(35358180)
|
Deep-Palm: 0.02
|
|
| 770 | - | - |
Brain
(35358180)
|
Deep-Palm: 0.04
|
|
| 779 | - | - | - |
Deep-Palm: 0.06
|
|
| 787 | - | - | - |
Deep-Palm: 0.12
|
|
| 798 | - | - | - |
Deep-Palm: 0.22
|
|
| 815 | - | - | - |
Deep-Palm: 0.48
|
|
| 867 | - | - | - |
Deep-Palm: 0.28
|
|
| 892 | - | - | - |
Deep-Palm: 0.90
|
|
| 908 | - | - | - |
Deep-Palm: 0.86
|
|
| 917 | - | - | - |
Deep-Palm: 0.47
|
|
| 928 | - | - | - |
Deep-Palm: 0.39
|
|
| 932 | - | - | - |
Deep-Palm: 0.57
|
|
| 938 | - | - | - |
Deep-Palm: 0.06
|
|
| 941 | - | - | - |
Deep-Palm: 0.04
|
|
| 948 | - | - | - |
Deep-Palm: 0.04
|
|
| 951 | - | - | - |
Deep-Palm: 0.04
|
|
| 957 | - | - | - |
Deep-Palm: 0.03
|
|
| 972 | - | - | - |
Deep-Palm: 0.03
|
|
| 981 | - | - | - |
Deep-Palm: 0.02
|
|
| 986 | - | - | - |
Deep-Palm: 0.02
|
|
| 990 | - | - | - |
Deep-Palm: 0.02
|
|
| 992 | - | - | - |
Deep-Palm: 0.02
|
|
| 995 | - | - | - |
Deep-Palm: 0.02
|
|
| 1001 | - | - | - |
Deep-Palm: 0.04
|
|
| 1004 | - | - | - |
Deep-Palm: 0.07
|
|
| 1015 | - |
brain
(39008777)
| - |
Deep-Palm: 0.14
|
|
| 1046 | - | - | - |
Deep-Palm: 0.17
|
|
| 1059 | - | - | - |
Deep-Palm: 0.02
|
|
| 1062 | - | - | - |
Deep-Palm: 0.01
|
|
| 1064 | - | - | - |
Deep-Palm: 0.01
|
|
| 1070 | - | - | - |
Deep-Palm: 0.01
|
|
| 1076 | - | - | - |
Deep-Palm: 0.01
|
|
| 1079 | - | - | - |
Deep-Palm: 0.01
|
|
| 1088 | - | - | - |
Deep-Palm: 0.02
|
|
| 1091 | - | - | - |
Deep-Palm: 0.02
|
|
| 1105 | - | - | - |
Deep-Palm: 0.02
|
|
| 1108 | - | - | - |
Deep-Palm: 0.02
|
|
| 1110 | - | - | - |
Deep-Palm: 0.02
|
|
| 1117 | - | - | - |
Deep-Palm: 0.02
|
|
| 1124 | - | - | - |
Deep-Palm: 0.02
|
|
| 1126 | - | - | - |
Deep-Palm: 0.03
|
|
| 1136 | - | - |
Brain
(35358180)
|
Deep-Palm: 0.08
|
|
| 1139 | - | - |
Brain
(35358180)
|
Deep-Palm: 0.13
|
|
| 1154 | - | - | - |
Deep-Palm: 0.42
|
|
| 1288 | - | - | - |
Deep-Palm: 0.21
|
|
| 1306 | - | - | - |
GPS-Palm: 0.90
Deep-Palm: 0.98
|
|
| 1360 | - | - | - |
GPS-Palm: 0.90
Deep-Palm: 0.93
|
|
| 1427 | SWISSPALM DBPTM CYSMODDB | - |
Forebrain
(28680068)
| - |
GPS-Palm: 0.97
Deep-Palm: 0.02
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.600
3
Liver
Specificity: 0.176
3/3 (100.0%)
1
Raw 264.7
Specificity: 0.059
1/1 (100.0%)
1
NSC
Specificity: 0.059
1/1 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.917
11
Brain tissue (Mass)
Specificity: 0.647
11/56 (19.6%)
1
Neural Stem Cells (Mass)
Specificity: 0.059
1/1 (100.0%)
Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.