Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| Q9WU84 | Ccs | Copper chaperone for superoxide dismutase … | Mus musculus (Mouse) | 274 aa |
Protein Details: Q9WU84 (Ccs)
Protein Information
| Accession | Q9WU84 |
|---|---|
| Protein Names | Copper chaperone for superoxide dismutase (Superoxide dismutase copper chaperone) |
| Gene Symbol | Ccs |
| Organism | Mus musculus (Mouse) |
| Length | 274 aa |
| Isoforms | No isoforms |
| Related PMIDs | 28526873 35477839 37925639 |
| Database Sources | CysModDBdbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MASKSGDGGT11VCALEFAVQM21SCQSCVDAVH31KTLKGVAGVQ41NVDVQLENQM
51-10051VLVQTTLPSQ61EVQALLESTG71RQAVLKGMGS81SQLQNLGAAV91AILEGCGSIQ
101-150101GVVRFLQLSS111ELCLIEGTID121GLEPGLHGLH131VHQYGDLTRD141CNSCGDHFNP
151-200151DGASHGGPQD161TDRHRGDLGN171VRAEAGGRAT181FRIEDKQLKV191WDVIGRSLVI
201-250201DEGEDDLGRG211GHPLSKITGN221SGKRLACGII231ARSAGLFQNP241KQICSCDGLT
251-274251IWEERGRPIA261GQGRKDSAQP271PAHL
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 12 | - | - | - |
Deep-Palm: 0.09
|
|
| 22 | Heavy metal-associated domain, HMA Heavy metal-associated domain superfamily | - | - |
Deep-Palm: 0.44
|
|
| 25 | Heavy metal-associated domain, HMA Heavy metal-associated domain superfamily | - | - |
Deep-Palm: 0.39
|
|
| 96 | SWISSPALM DBPTM CYSMODDB | - |
Liver
(28526873)
| - |
Deep-Palm: 0.96
|
| 113 | - | - | - |
Deep-Palm: 0.90
|
|
| 141 | - | - | - |
Deep-Palm: 0.06
|
|
| 144 | - | - | - |
Deep-Palm: 0.07
|
|
| 227 | SWISSPALM DBPTM CYSMODDB | - |
Liver
(28526873)
MLE
(39008777)
| - |
GPS-Palm: 0.95
Deep-Palm: 0.94
|
| 244 | - | - | - |
Deep-Palm: 0.66
|
|
| 246 | - | - | - |
GPS-Palm: 0.90
Deep-Palm: 0.81
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.667
4
Liver
Specificity: 0.667
4/4 (100.0%)
2
Testis
Specificity: 0.333
2/2 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.000Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.