Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| Q9WUA2 | Farsb | Phenylalanine--tRNA ligase beta subunit (EC … | Mus musculus (Mouse) | 589 aa |
Protein Details: Q9WUA2 (Farsb)
Protein Information
| Accession | Q9WUA2 |
|---|---|
| Protein Names | Phenylalanine--tRNA ligase beta subunit (EC 6.1.1.20) (Phenylalanyl-tRNA synthetase beta subunit) (PheRS) |
| Gene Symbol | Farsb |
| Organism | Mus musculus (Mouse) |
| Length | 589 aa |
| Isoforms | No isoforms |
| Related PMIDs | 28526873 29733200 34884899 37925639 |
| Database Sources | CysModDBdbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MPTVSVKRDL11LFQALGRTYT21DEEFDELCFE31FGLELDEITS41EKQIISKEQG
51-10051HGKAQGASDV61VLYKIDVPAN71RYDLLCLEGL81ARGLQVFKER91IKAPVYKRVM
101-150101PKGDIQKLVI111TEETAKVRPF121AVAAVLRNIK131FTKDRYDSFI141ELQEKLHQNI
151-200151CRKRALVAIG161THDLDTLSGP171FTYTAKRPSD181IKFKPLNKTK191EYTACELMNI
201-250201YKTDNHLKHY211LHIIESKPLY221PVIYDSNGVV231LSMPPIINGN241HSKITVNTRN
251-300251IFIECTGTDF261TKAKIVLDII271VTMFSEHCEN281QFTVEAVEVV291SPNGKSSTFP
301-350301ELPYRKEMVR311ADLINKKVGI321RETPANLAKL331LTRMCLKSEV341IGDGNQIEVE
351-400351IPPTRADVIH361ACDIVEDAAI371AYGYNNIQMT381LPKTYTIANQ391FPLNKLTELL
401-450401RLDMAAAGFT411EALTFALCSQ421EDIADKLGLD431ISATKAVHIS441NPKTAEFQVA
451-500451RTTLLPGLLK461TIAANRKMPL471PLKLFEISDV481VVKDSGKDVG491AKNYRHLCAV
501-550501YYNKTPGFEI511IHGLLDRIMQ521LLDVPPGEES531GGYMIKASAG541SAFFPGRCAE
551-589551IFVGGQSIGK561LGVLHPDVIT571KFELTMPCSS581LEINIEPFL
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 28 | Phenylalanine--tRNA ligase beta subunit, B1 domain Phenylalanine-tRNA ligase, class IIc, beta subunit | - | - |
Deep-Palm: 0.73
|
|
| 76 | SWISSPALM DBPTM CYSMODDB | Phe-tRNA synthetase beta subunit B1 domain |
liver
(26165157)
Liver
(28526873)
| - |
Deep-Palm: 0.97
|
| 151 | - | - | - |
Deep-Palm: 0.89
|
|
| 195 | SWISSPALM DBPTM CYSMODDB | - |
Liver
(28526873)
| - |
Deep-Palm: 0.26
|
| 255 | - | - | - |
Deep-Palm: 0.72
|
|
| 278 | - | - | - |
Deep-Palm: 0.08
|
|
| 335 | - | - | - |
Deep-Palm: 0.98
|
|
| 362 | - | - | - |
Deep-Palm: 0.62
|
|
| 418 | - | - | - |
Deep-Palm: 0.98
|
|
| 498 | - | - | - |
Deep-Palm: 0.76
|
|
| 548 | - | - | - |
Deep-Palm: 0.96
|
|
| 578 | - | - | - |
Deep-Palm: 0.06
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.857
6
Liver
Specificity: 0.857
6/6 (100.0%)
1
Brain
Specificity: 0.143
1/1 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.000Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.