Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| Q9WUB3 | Pygm | Glycogen phosphorylase, muscle form (EC … | Mus musculus (Mouse) | 842 aa |
Protein Details: Q9WUB3 (Pygm)
Protein Information
| Accession | Q9WUB3 |
|---|---|
| Protein Names | Glycogen phosphorylase, muscle form (EC 2.4.1.1) (Myophosphorylase) |
| Gene Symbol | Pygm |
| Organism | Mus musculus (Mouse) |
| Length | 842 aa |
| Isoforms | No isoforms |
| Related PMIDs | 29733200 35358180 29217618 (mass) 31311849 (mass) 31772009 (mass) 34884899 (mass) 35358180 (mass) 37925639 (mass) |
| Database Sources | CysModDBdbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MSRPLSDQDK11RKQISVRGLA21GVENVSELKK31NFNRHLHFTL41VKDRNVATPR
51-10051DYYFALAHTV61RDHLVGRWIR71TQQHYYEKDP81KRIYYLSLEF91YMGRTLQNTM
101-150101VNLALENACD111EATYQLGLDM121EELEEIEEDA131GLGNGGLGRL141AACFLDSMAT
151-200151LGLAAYGYGI161RYEFGIFNQK171ICGGWQMEEA181DDWLRYGNPW191EKARPEFTLP
201-250201VHFYGRVEHT211SQGAKWVDTQ221VVLAMPYDTP231VPGYRNNVVN241TMRLWSAKAP
251-300251NDFNLKDFNV261GGYIQAVLDR271NLAENISRVL281YPNDNFFEGK291ELRLKQEYFV
301-350301VAATLQDIIR311RFKSSKFGSR321DPVRTNFDAF331PDKVAIQLND341THPSLAIPEL
351-400351MRILVDLERL361DWDKAWDVTV371KTCAYTNHTV381LPEALERWPV391HLMETLLPRH
401-450401LQIIYEINQR411FLNRVAAAFP421GDVDRLRRMS431LVEEGAVKRI441NMAHLCIAGS
451-500451HAVNGVARIH461SEILKKTIFK471DFYELEPHKF481QNKTNGITPR491RWLVLCNPGL
501-550501AEVIAERIGE511DYISDLDQLR521KLLSYVDDEA531FIRDVAKVKQ541ENKLKFSAYL
551-600551EREYKVHINP561NSLFDVQVKR571IHEYKRQLLN581CLHIITLYNR591IKREPNRFMV
601-650601PRTIMIGGKA611APGYHMAKMI621IKLITAIGDV631VNHDPAVGDR641LRVIFLENYR
651-700651VSLAEKVIPA661ADLSEQISTA671GTEASGTGNM681KFMLNGALTI691GTMDGANVEM
701-750701AEEAGEENFF711IFGMRVEDVE721RLDQRGYNAQ731EYYDRIPELR741QIIEQLSSGF
751-800751FSPKQPDLFK761DIVNMLMHHD771RFKVFADYEE781YIKCQDKVSE791LYKNPREWTR
801-842801MVIRNIATSG811KFSSDRTIAQ821YAREIWGVEP831SRQRLPAPDE841KI
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 109 | - | - | - |
Deep-Palm: 0.67
|
|
| 143 | - | - | - |
Deep-Palm: 0.96
|
|
| 172 | - | - |
Brain
(35358180)
|
Deep-Palm: 0.16
|
|
| 373 | - | - |
Brain
(35358180)
Brain
(31311849)
|
Deep-Palm: 0.84
|
|
| 446 | - | - | - |
Deep-Palm: 0.90
|
|
| 496 | - | - |
Brain
(35358180)
|
GPS-Palm: 0.91
Deep-Palm: 0.95
|
|
| 581 | SWISSPALM DBPTM CYSMODDB | Carbohydrate phosphorylase | - |
Brain
(35358180)
|
Deep-Palm: 0.83
|
| 784 | - | - | - |
Deep-Palm: 0.22
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
2
Brain
Specificity: 0.118
2/2 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
15
Brain tissue (Mass)
Specificity: 0.882
15/56 (26.8%)
Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.