Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| Q9WUM5 | Suclg1 | Succinate--CoA ligase [ADP/GDP-forming] subunit alpha, … | Mus musculus (Mouse) | 346 aa |
Protein Details: Q9WUM5 (Suclg1)
Protein Information
| Accession | Q9WUM5 |
|---|---|
| Protein Names | Succinate--CoA ligase [ADP/GDP-forming] subunit alpha, mitochondrial (EC 6.2.1.4) (EC 6.2.1.5) (Itaconyl--CoA ligase [ADP/GDP-forming] subunit alpha) (EC 6.2.1.-) (Malyl--CoA ligase [ADP/GDP-forming] subunit alpha) (EC 6.2.1.9) (Succinyl-CoA synthetase subunit alpha) (SCS-alpha) |
| Gene Symbol | Suclg1 |
| Organism | Mus musculus (Mouse) |
| Length | 346 aa |
| Isoforms | No isoforms |
| Related PMIDs | 28526873 29733200 31311849 34200797 34884899 35358180 35477839 37925639 29217618 (mass) 31311849 (mass) 31772009 (mass) 34884899 (mass) 35358180 (mass) 37925639 (mass) |
| Database Sources | CysModDBdbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MTATVVAAAA11TATMVSSSSG21LAAARLLSRT31FLLQQNGIRH41GSYTASRKHI
51-10051YIDKNTKIIC61QGFTGKQGTF71HSQQALEYGT81KLVGGTTPGK91GGQKHLGLPV
101-150101FNTVKEAKEK111TGATASVIYV121PPPFAAAAIN131EAIDAEIPLV141VCITEGIPQQ
151-200151DMVRVKHRLT161RQGTTRLIGP171NCPGVINPGE181CKIGIMPGHI191HKKGRIGIVS
201-250201RSGTLTYEAV211HQTTQVGLGQ221SLCIGIGGDP231FNGTDFIDCL241EVFLNDPATE
251-300251GIILIGEIGG261HAEENAAAFL271KEHNSGPKAK281PVVSFIAGIT291APPGRRMGHA
301-346301GAIIAGGKGG311AKEKISALQS321AGVVVSMSPA331QLGTTIYKEF341EKRKML
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 60 | SWISSPALM DBPTM CYSMODDB | CoA binding domain |
Liver
(28526873)
Brain
(31311849)
liver
(26165157)
brain
(39008777)
MLE
(39008777)
|
Brain
(35358180)
Brain
(31311849)
|
Deep-Palm: 0.60
|
| 142 | - | - | - |
Deep-Palm: 0.95
|
|
| 172 | SWISSPALM DBPTM CYSMODDB | - |
Liver
(28526873)
brain
(39008777)
MLE
(39008777)
|
Brain
(35358180)
Brain
(31311849)
|
Deep-Palm: 0.82
|
| 181 | SWISSPALM DBPTM CYSMODDB | - |
Liver
(28526873)
brain
(39008777)
MLE
(39008777)
|
Brain
(35358180)
Brain
(31311849)
|
Deep-Palm: 0.51
|
| 223 | - | - | - |
Deep-Palm: 0.82
|
|
| 239 | - | - | - |
Deep-Palm: 0.90
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.417
5
Liver
Specificity: 0.119
5/5 (100.0%)
5
Brain
Specificity: 0.119
5/5 (100.0%)
2
Testis
Specificity: 0.048
2/2 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
30
Brain tissue (Mass)
Specificity: 0.714
30/56 (53.6%)
Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.