Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| Q9WV32 | Arpc1b | Actin-related protein 2/3 complex subunit … | Mus musculus (Mouse) | 372 aa |
Protein Details: Q9WV32 (Arpc1b)
Protein Information
| Accession | Q9WV32 |
|---|---|
| Protein Names | Actin-related protein 2/3 complex subunit 1B (Arp2/3 complex 41 kDa subunit) (p41-ARC) |
| Gene Symbol | Arpc1b |
| Organism | Mus musculus (Mouse) |
| Length | 372 aa |
| Isoforms | No isoforms |
| Related PMIDs | 28526873 34884899 35358180 37925639 29217618 (mass) 31311849 (mass) 31772009 (mass) 34884899 (mass) 35358180 (mass) 37925639 (mass) |
| Database Sources | CysModDBdbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MAYHSFLVEP11ISCHAWNKDR21TQIAICPNNH31EVHIYEKSGA41KWNKVHELKE
51-10051HNGQVTGIDW61APESNRIVTC71GTDRNAYVWT81LKGRTWKPTL91VILRINRAAR
101-150101CVRWAPNENK111FAVGSGSRVI121SICYFEQEND131WWVCKHIKKP141IRSTVLSLDW
151-200151HPNNVLLAAG161SCDFKCRIFS171AYIKEVEERP181APTPWGSKMP191FGELMFESSS
201-250201SCGWVHGVCF211SASGSRVAWV221SHDSTVCLVD231ADKKMAVATL241ASETLPLLAV
251-300251TFITENSLVA261AGHDCFPVLF271TYDNAAVTLS281FGGRLDVPKQ291SSQRGMTARE
301-350301RFQNLDKKAS311SEGGAATGAG321LDSLHKNSVS331QISVLSGGKA341KCSQFCTTGM
351-372351DGGMSIWDVK361SLESALKDLK371IK
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 13 | WD40/YVTN repeat-like-containing domain superfamily Actin-related protein 2/3 complex subunit 1 | - |
Brain
(35358180)
|
Deep-Palm: 0.03
|
|
| 26 | SWISSPALM DBPTM CYSMODDB | WD40-repeat-containing domain superfamily WD40/YVTN repeat-like-containing domain superfamily Actin-related protein 2/3 complex subunit 1 |
Liver
(28526873)
| - |
Deep-Palm: 0.30
|
| 70 | - | - | - |
Deep-Palm: 0.71
|
|
| 101 | - | - | - |
GPS-Palm: 0.90
Deep-Palm: 0.94
|
|
| 123 | - | - | - |
Deep-Palm: 0.12
|
|
| 134 | - | - | - |
Deep-Palm: 0.17
|
|
| 162 | - | - |
Brain
(35358180)
Brain
(31311849)
|
Deep-Palm: 0.39
|
|
| 166 | - | - | - |
Deep-Palm: 0.72
|
|
| 202 | - | - | - |
Deep-Palm: 0.38
|
|
| 209 | - | - | - |
Deep-Palm: 0.11
|
|
| 227 | - | - | - |
Deep-Palm: 0.93
|
|
| 265 | - | - | - |
Deep-Palm: 0.73
|
|
| 342 | - | - | - |
Deep-Palm: 0.31
|
|
| 346 | - | - | - |
Deep-Palm: 0.25
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.833
5
Liver
Specificity: 0.294
5/5 (100.0%)
1
Brain
Specificity: 0.059
1/1 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
11
Brain tissue (Mass)
Specificity: 0.647
11/56 (19.6%)
Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.