Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| Q9Y2W1 | THRAP3 | Thyroid hormone receptor-associated protein 3 … | Homo sapiens (Human) | 955 aa |
Protein Details: Q9Y2W1 (THRAP3)
Protein Information
| Accession | Q9Y2W1 |
|---|---|
| Protein Names | Thyroid hormone receptor-associated protein 3 (BCLAF1 and THRAP3 family member 2) (Thyroid hormone receptor-associated protein complex 150 kDa component) (Trap150) |
| Gene Symbol | THRAP3 |
| Organism | Homo sapiens (Human) |
| Length | 955 aa |
| Isoforms | No isoforms |
| Related PMIDs | 25914232 31251020 31382980 |
| Database Sources | SwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MSKTNKSKSG11SRSSRSRSAS21RSRSRSFSKS31RSRSRSLSRS41RKRRLSSRSR
51-10051SRSYSPAHNR61ERNHPRVYQN71RDFRGHNRGY81RRPYYFRGRN91RGFYPWGQYN
101-150101RGGYGNYRSN111WQNYRQAYSP121RRGRSRSRSP131KRRSPSPRSR141SHSRNSDKSS
151-200151SDRSRRSSSS161RSSSNHSRVE171SSKRKSAKEK181KSSSKDSRPS191QAAGDNQGDE
201-250201AKEQTFSGGT211SQDTKASESS221KPWPDATYGT231GSASRASAVS241ELSPRERSPA
251-300251LKSPLQSVVV261RRRSPRPSPV271PKPSPPLSST281SQMGSTLPSG291AGYQSGTHQG
301-350301QFDHGSGSLS311PSKKSPVGKS321PPSTGSTYGS331SQKEESAASG341GAAYTKRYLE
351-400351EQKTENGKDK361EQKQTNTDKE371KIKEKGSFSD381TGLGDGKMKS391DSFAPKTDSE
401-450401KPFRGSQSPK411RYKLRDDFEK421KMADFHKEEM431DDQDKDKAKG441RKESEFDDEP
451-500451KFMSKVIGAN461KNQEEEKSGK471WEGLVYAPPG481KEKQRKTEEL491EEESFPERSK
501-550501KEDRGKRSEG511GHRGFVPEKN521FRVTAYKAVQ531EKSSSPPPRK541TSESRDKLGA
551-600551KGDFPTGKSS561FSITREAQVN571VRMDSFDEDL581ARPSGLLAQE591RKLCRDLVHS
601-650601NKKEQEFRSI611FQHIQSAQSQ621RSPSELFAQH631IVTIVHHVKE641HHFGSSGMTL
651-700651HERFTKYLKR661GTEQEAAKNK671KSPEIHRRID681ISPSTFRKHG691LAHDEMKSPR
701-750701EPGYKAEGKY711KDDPVDLRLD721IERRKKHKER731DLKRGKSRES741VDSRDSSHSR
751-800751ERSAEKTEKT761HKGSKKQKKH771RRARDRSRSS781SSSSQSSHSY791KAEEYTEETE
801-850801EREESTTGFD811KSRLGTKDFV821GPSERGGGRA831RGTFQFRARG841RGWGRGNYSG
851-900851NNNNNSNNDF861QKRNREEEWD871PEYTPKSKKY881YLHDDREGEG891SDKWVSRGRG
901-950901RGAFPRGRGR911FMFRKSSTSP921KWAHDKFSGE931EGEIEDDESG941TENREEKDNI
951-955951QPTTE
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 594 | - | - | - |
GPS-Palm: 0.89
Deep-Palm: 0.96
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.400
2
LNCaP
Specificity: 0.400
2/2 (100.0%)
2
CEM 174 cell
Specificity: 0.400
2/2 (100.0%)
1
U937 cell
Specificity: 0.200
1/1 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.000Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.
Conservation score for cysteine
PhyloP for Cysteine
PhastCons Conservation Scores for Cysteine
TCGA Cysteine Mutation Information
Note: Mutations indicate amino acid changes that may create potential palmitoylation sites.
| Position | Amino Acid Change | Frequency | Type | Function | Cancer Type |
|---|---|---|---|---|---|
| 12 | R → C | 0.002141 | SNP | Missense Mutation | SKCM |
| 13 | S → C | 0.001764 | SNP | Missense Mutation | LUAD |
| 23 | R → C | 0.001887 | SNP | Missense Mutation | UCEC |
| 25 | R → C | 0.002141 | SNP | Missense Mutation | SKCM |
| 39 | R → C | 0.002427 | SNP | Missense Mutation | BLCA |
| 50 | R → C | 0.002141 | SNP | Missense Mutation | SKCM |
| 143 | S → C | 0.002506 | SNP | Missense Mutation | COAD |
| 266 | R → C | 0.001969 | SNP | Missense Mutation | HNSC |
| 270 | V → Cfs*40 | 0.002288 | DEL | Frame Shift Del | STAD |
| 575 | S → C | 0.002427 | SNP | Missense Mutation | BLCA |
| 575 | S → C | 0.002033 | SNP | Missense Mutation | LUSC |
| 608 | R → C | 0.002288 | SNP | Missense Mutation | STAD |
| 608 | R → C | 0.002141 | SNP | Missense Mutation | SKCM |
| 819 | F → Cfs*5 | 0.002294 | DEL | Frame Shift Del | OV |
| 873 | Y → C | 0.002288 | SNP | Missense Mutation | STAD |
| 886 | R → C | 0.002288 | SNP | Missense Mutation | STAD |