Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| Q9Y3C5 | RNF11; CGI-123 | RING finger protein 11 | Homo sapiens (Human) | 154 aa |
Protein Details: Q9Y3C5 (RNF11)
Protein Information
| Accession | Q9Y3C5 |
|---|---|
| Protein Names | RING finger protein 11 |
| Gene Symbol | RNF11; CGI-123 |
| Organism | Homo sapiens (Human) |
| Length | 154 aa |
| Isoforms | No isoforms |
| Related PMIDs | 26111759 29733200 31251020 32944167 |
| Database Sources | dbPTM |
These studies detected palmitoylation of this protein in the samples.
Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.783
Bubble Size: Positive Samples Count
Color Intensity: Positive Ratio
36
LNCaP cells
Specificity: 0.783
36/46 (78.3%)
4
HAP1 cells
Specificity: 0.087
4/10 (40.0%)
3
PC3 cells
Specificity: 0.065
3/4 (75.0%)
3
T cells
Specificity: 0.065
3/4 (75.0%)
0
Jurkat T cells
Specificity: 0.000
0/25 (0.0%)
0
U937 cells
Specificity: 0.000
0/1 (0.0%)
0
DU145 cells
Specificity: 0.000
0/2 (0.0%)
0
HeLa cells
Specificity: 0.000
0/1 (0.0%)
0
293T cells
Specificity: 0.000
0/10 (0.0%)
0
CEMx174 cells
Specificity: 0.000
0/3 (0.0%)
0
Endothelial cells
Specificity: 0.000
0/2 (0.0%)
0
Prefrontal cortex
Specificity: 0.000
0/1 (0.0%)
0
Cerebral cortex
Specificity: 0.000
0/4 (0.0%)
0
Liver membrane
Specificity: 0.000
0/1 (0.0%)
Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.
Bars are grouped by tissue/cell line for easy comparison.
Protein Sequence
Single Types:
Experimental Database High Prediction Medium Prediction Low Prediction
Experimental Database High Prediction Medium Prediction Low Prediction
Combined Types:
All Three Exp + DB Exp + High Pred Exp + Med Pred Exp + Low Pred DB + High Pred DB + Med Pred DB + Low Pred Cysteine
All Three Exp + DB Exp + High Pred Exp + Med Pred Exp + Low Pred DB + High Pred DB + Med Pred DB + Low Pred Cysteine
1-501MGNCLKSPTS11DDISLLHESQ21SDRASFGEGT31EPDQEPPPPY41QEQVPVPVYH
51-10051PTPSQTRLAT61QLTEEEQIRI71AQRIGLIQHL81PKGVYDPGRD91GSEKKIRECV
101-150101ICMMDFVYGD111PIRFLPCMHI121YHLDCIDDWL131MRSFTCPSCM141EPVDAALLSS
151-154151YETN
Palmitoylation Sites Details
| Position | Sources | Domains | Experimental PMIDs |
|---|---|---|---|
| 4 | DBPTM Prediction (High) | - | - |
| 99 | Prediction (Low) | - | - |
Conservation Scores
PhyloP
PhastCons
TCGA Cysteine Mutation Information
Note: Mutations indicate amino acid changes that may create potential palmitoylation sites.
| Position | Amino Acid Change | Frequency | Type | Function | Cancer Type |
|---|---|---|---|---|---|
| 136 | C → Y | 0.002288 | SNP | Missense Mutation | STAD |
| 139 | C → C | 0.005618 | SNP | Silent | PAAD |