Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| Q9Y3L5 | RAP2C | Ras-related protein Rap-2c (EC 3.6.5.2) | Homo sapiens (Human) | 183 aa |
Protein Details: Q9Y3L5 (RAP2C)
Protein Information
| Accession | Q9Y3L5 |
|---|---|
| Protein Names | Ras-related protein Rap-2c (EC 3.6.5.2) |
| Gene Symbol | RAP2C |
| Organism | Homo sapiens (Human) |
| Length | 183 aa |
| Isoforms | No isoforms |
| Related PMIDs | 19137006 19801377 22496122 24357059 26111759 29733200 31251020 31382980 32651440 33636221 31251020 (mass) 32651440 (mass) 36430497 (mass) |
| Database Sources | dbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MREYKVVVLG11SGGVGKSALT21VQFVTGTFIE31KYDPTIEDFY41RKEIEVDSSP
51-10051SVLEILDTAG61TEQFASMRDL71YIKNGQGFIL81VYSLVNQQSF91QDIKPMRDQI
101-150101VRVKRYEKVP111LILVGNKVDL121EPEREVMSSE131GRALAQEWGC141PFMETSAKSK
151-183151SMVDELFAEI161VRQMNYSSLP171EKQDQCCTTC181VVQ
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 140 | DBPTM SWISSPALM | Ras family | - | - |
GPS-Palm: 0.83
Deep-Palm: 0.98
|
| 176 | DBPTM SWISSPALM | - | - | - |
GPS-Palm: 0.75
Deep-Palm: 0.02
|
| 177 | DBPTM SWISSPALM | - | - | - |
GPS-Palm: 0.85
Deep-Palm: 0.02
|
| 180 | - | - | - |
GPS-Palm: 0.96
Deep-Palm: 0.02
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.429
9
Jurkat T cell
Specificity: 0.391
9/9 (100.0%)
3
LNCaP
Specificity: 0.130
3/3 (100.0%)
3
Primary T cell
Specificity: 0.130
3/3 (100.0%)
1
HAP1 cell
Specificity: 0.043
1/1 (100.0%)
1
U937 cell
Specificity: 0.043
1/1 (100.0%)
1
EC cell
Specificity: 0.043
1/1 (100.0%)
1
heart
Specificity: 0.043
1/1 (100.0%)
1
HUVECs
Specificity: 0.043
1/1 (100.0%)
1
DU145 cell
Specificity: 0.043
1/1 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
2
Cerebral Cortex (Mass)
Specificity: 0.087
2/4 (50.0%)
Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.