Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| Q9Y3S2 | ZNF330 | Zinc finger protein 330 (Nucleolar … | Homo sapiens (Human) | 320 aa |
Protein Details: Q9Y3S2 (ZNF330)
Protein Information
| Accession | Q9Y3S2 |
|---|---|
| Protein Names | Zinc finger protein 330 (Nucleolar autoantigen 36) (Nucleolar cysteine-rich protein) |
| Gene Symbol | ZNF330 |
| Organism | Homo sapiens (Human) |
| Length | 320 aa |
| Isoforms | No isoforms |
| Related PMIDs | 29733200 |
| Database Sources | CysModDBdbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MPKKKTGARK11KAENRREREK21QLRASRSTID31LAKHPCNASM41ECDKCQRRQK
51-10051NRAFCYFCNS61VQKLPICAQC71GKTKCMMKSS81DCVIKHAGVY91STGLAMVGAI
101-150101CDFCEAWVCH111GRKCLSTHAC121ACPLTDAECV131ECERGVWDHG141GRIFSCSFCH
151-200151NFLCEDDQFE161HQASCQVLEA171ETFKCVSCNR181LGQHSCLRCK191ACFCDDHTRS
201-250201KVFKQEKGKQ211PPCPKCGHET221QETKDLSMST231RSLKFGRQTG241GEEGDGASGY
251-300251DAYWKNLSSD261KYGDTSYHDE271EEDEYEAEDD281EEEEDEGRKD291SDTESSDLFT
301-320301NLNLGRTYAS311GYAHYEEQEN
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 36 | Zinc finger protein NOA36 | - | - |
Deep-Palm: 0.48
|
|
| 42 | Zinc finger protein NOA36 | - | - |
GPS-Palm: 0.67
Deep-Palm: 0.07
|
|
| 45 | Zinc finger protein NOA36 | - | - |
GPS-Palm: 0.68
Deep-Palm: 0.02
|
|
| 55 | - | - | - |
GPS-Palm: 0.91
Deep-Palm: 0.05
|
|
| 58 | - | - | - |
GPS-Palm: 0.72
Deep-Palm: 0.11
|
|
| 67 | - | - | - |
GPS-Palm: 0.75
Deep-Palm: 0.04
|
|
| 70 | - | - | - |
GPS-Palm: 0.86
Deep-Palm: 0.03
|
|
| 75 | - | - | - |
Deep-Palm: 0.08
|
|
| 82 | - | - | - |
GPS-Palm: 0.70
Deep-Palm: 0.13
|
|
| 101 | - | - | - |
Deep-Palm: 0.14
|
|
| 104 | - | - | - |
GPS-Palm: 0.72
Deep-Palm: 0.09
|
|
| 109 | - | - | - |
Deep-Palm: 0.07
|
|
| 114 | SWISSPALM DBPTM CYSMODDB | NOA36 protein | - | - |
Deep-Palm: 0.12
|
| 120 | SWISSPALM DBPTM CYSMODDB | NOA36 protein | - | - |
Deep-Palm: 0.31
|
| 122 | SWISSPALM DBPTM CYSMODDB | NOA36 protein | - | - |
Deep-Palm: 0.16
|
| 129 | SWISSPALM DBPTM CYSMODDB | NOA36 protein | - | - |
Deep-Palm: 0.21
|
| 132 | SWISSPALM DBPTM CYSMODDB | NOA36 protein | - | - |
Deep-Palm: 0.13
|
| 146 | - | - | - |
Deep-Palm: 0.02
|
|
| 149 | - | - | - |
Deep-Palm: 0.02
|
|
| 154 | - | - | - |
Deep-Palm: 0.02
|
|
| 165 | - | - | - |
Deep-Palm: 0.04
|
|
| 175 | - | - | - |
Deep-Palm: 0.15
|
|
| 178 | - | - | - |
GPS-Palm: 0.68
Deep-Palm: 0.33
|
|
| 186 | - | - | - |
GPS-Palm: 0.73
Deep-Palm: 0.03
|
|
| 189 | - | - | - |
Deep-Palm: 0.04
|
|
| 192 | - | - | - |
GPS-Palm: 0.67
Deep-Palm: 0.10
|
|
| 194 | - | - | - |
Deep-Palm: 0.17
|
|
| 213 | - | - | - |
Deep-Palm: 0.09
|
|
| 216 | - | - | - |
Deep-Palm: 0.09
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
1
293T cell
Specificity: 1.000
1/1 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.000Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.
Conservation score for cysteine
PhyloP for Cysteine
PhastCons Conservation Scores for Cysteine
TCGA Cysteine Mutation Information
Note: Mutations indicate amino acid changes that may create potential palmitoylation sites.
| Position | Amino Acid Change | Frequency | Type | Function | Cancer Type |
|---|---|---|---|---|---|
| 42 | C → G | 0.003460 | SNP | Missense Mutation | CESC |
| 114 | C → C | 0.002288 | SNP | Silent | STAD |
| 178 | C → R | 0.001887 | SNP | Missense Mutation | UCEC |