Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| Q9Y6M4-3 | CSNK1G3 | Casein kinase I isoform gamma-3 … | Homo sapiens (Human) | 423 aa |
Protein Details: Q9Y6M4-3 (CSNK1G3)
Protein Information
| Accession | Q9Y6M4-3 |
|---|---|
| Protein Names | Casein kinase I isoform gamma-3 (CKI-gamma 3) (EC 2.7.11.1) |
| Gene Symbol | CSNK1G3 |
| Organism | Homo sapiens (Human) |
| Length | 423 aa |
| Isoforms | |
| Related PMIDs | 26111759 31251020 |
| Database Sources | No database sources |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MENKKKDKDK11SDDRMARPSG21RSGHNTRGTG31SSSSGVLMVG41PNFRVGKKIG
51-10051CGNFGELRLG61KNLYTNEYVA71IKLEPMKSRA81PQLHLEYRFY91KQLGSGDGIP
101-150101QVYYFGPCGK111YNAMVLELLG121PSLEDLFDLC131DRTFSLKTVL141MIAIQLISRM
151-200151EYVHSKNLIY161RDVKPENFLI171GRPGNKTQQV181IHIIDFGLAK191EYIDPETKKH
201-250201IPYREHKSLT211GTARYMSINT221HLGKEQSRRD231DLEALGHMFM241YFLRGSLPWQ
251-300251GLKADTLKER261YQKIGDTKRA271TPIEVLCENF281PEMATYLRYV291RRLDFFEKPD
301-350301YDYLRKLFTD311LFDRKGYMFD321YEYDWIGKQL331PTPVGAVQQD341PALSSNREAH
351-400351QHRDKMQQSK361NQVVSSTNGE371LNTDDPTAGR381SNAPITAPTE391VEVMDETNCQ
401-423401KVLNMWCCCF411FKRRKRKTIQ421RHK
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 51 | Phosphorylase Kinase | - | - |
GPS-Palm: 0.95
Deep-Palm: 0.93
|
|
| 108 | - | - | - |
Deep-Palm: 0.95
|
|
| 130 | - | - | - |
Deep-Palm: 0.97
|
|
| 277 | - | - | - |
Deep-Palm: 0.90
|
|
| 407 | - | - | - |
GPS-Palm: 0.97
|
|
| 408 | - | - | - |
GPS-Palm: 0.98
|
|
| 409 | - | - | - |
GPS-Palm: 0.98
|
|
| 431 | - | - | - |
Deep-Palm: 0.72
|
|
| 432 | - | - | - |
Deep-Palm: 0.80
|
|
| 433 | - | - | - |
Deep-Palm: 0.69
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.667
4
LNCaP
Specificity: 0.667
4/4 (100.0%)
2
Jurkat T cell
Specificity: 0.333
2/2 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.000Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.
Conservation score for cysteine
PhyloP for Cysteine
PhastCons Conservation Scores for Cysteine
TCGA Cysteine Mutation Information
Note: Mutations indicate amino acid changes that may create potential palmitoylation sites.
| Position | Amino Acid Change | Frequency | Type | Function | Cancer Type |
|---|---|---|---|---|---|
| 52 | G → C | 0.001764 | SNP | Missense Mutation | LUAD |
| 64 | Y → C | 0.002506 | SNP | Missense Mutation | COAD |
| 236 | G → C | 0.001887 | SNP | Missense Mutation | UCEC |
| 288 | R → C | 0.002033 | SNP | Missense Mutation | LUSC |
| 288 | R → C | 0.001887 | SNP | Missense Mutation | UCEC |
| 445 | R → C | 0.002506 | SNP | Missense Mutation | COAD |
| 445 | R → C | 0.001887 | SNP | Missense Mutation | UCEC |