Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| Q9Z0L0 | Tpbg | Trophoblast glycoprotein (5T4 oncofetal trophoblast … | Mus musculus (Mouse) | 426 aa |
Protein Details: Q9Z0L0 (Tpbg)
Protein Information
| Accession | Q9Z0L0 |
|---|---|
| Protein Names | Trophoblast glycoprotein (5T4 oncofetal trophoblast glycoprotein) (5T4 oncotrophoblast glycoprotein) (Wnt-activated inhibitory factor 1) (WAIF1) |
| Gene Symbol | Tpbg |
| Organism | Mus musculus (Mouse) |
| Length | 426 aa |
| Isoforms | No isoforms |
| Related PMIDs | 31772009 34200797 |
| Database Sources | CysModDBdbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MPGAGSRGPS11AGDGRLRLAR21LALVLLGWVS31ASAPSSSVPS41SSTSPAAFLA
51-10051SGSAQPPPAE61RCPAACECSE71AARTVKCVNR81NLLEVPADLP91PYVRNLFLTG
101-150101NQMTVLPAGA111FARQPPLADL121EALNLSGNHL131KEVCAGAFEH141LPGLRRLDLS
151-200151HNPLTNLSAF161AFAGSNASVS171APSPLEELIL181NHIVPPEDQR191QNGSFEGMVA
201-250201FEGMVAAALR211SGLALRGLTR221LELASNHFLF231LPRDLLAQLP241SLRYLDLRNN
251-300251SLVSLTYASF261RNLTHLESLH271LEDNALKVLH281NSTLAEWHGL291AHVKVFLDNN
301-350301PWVCDCYMAD311MVAWLKETEV321VPDKARLTCA331FPEKMRNRGL341LDLNSSDLDC
351-400351DAVLPQSLQT361SYVFLGIVLA371LIGAIFLLVL381YLNRKGIKKW391MHNIRDACRD
401-426401HMEGYHYRYE411INADPRLTNL421SSNSDV
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 62 | - | - | - |
Deep-Palm: 0.82
|
|
| 66 | - | - | - |
Deep-Palm: 0.52
|
|
| 68 | - | - | - |
Deep-Palm: 0.69
|
|
| 77 | - | - | - |
Deep-Palm: 0.73
|
|
| 134 | - | - | - |
Deep-Palm: 0.98
|
|
| 304 | - | - | - |
Deep-Palm: 0.03
|
|
| 306 | - | - | - |
Deep-Palm: 0.04
|
|
| 329 | SWISSPALM DBPTM CYSMODDB | - |
Forebrain
(28680068)
brain
(39008777)
MLE
(39008777)
| - |
GPS-Palm: 0.91
Deep-Palm: 0.97
|
| 350 | - | - | - |
Deep-Palm: 0.97
|
|
| 398 | - | - |
Brain
(35358180)
|
Deep-Palm: 0.04
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.667
2
Brain
Specificity: 0.667
2/2 (100.0%)
1
NSC
Specificity: 0.333
1/1 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.000Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.