Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| Q9Z0V2 | Kcnd2 | A-type voltage-gated potassium channel KCND2 … | Mus musculus (Mouse) | 630 aa |
Protein Details: Q9Z0V2 (Kcnd2)
Protein Information
| Accession | Q9Z0V2 |
|---|---|
| Protein Names | A-type voltage-gated potassium channel KCND2 (Potassium voltage-gated channel subfamily D member 2) (Voltage-gated potassium channel subunit Kv4.2) |
| Gene Symbol | Kcnd2 |
| Organism | Mus musculus (Mouse) |
| Length | 630 aa |
| Isoforms | No isoforms |
| Related PMIDs | 29733200 34200797 35358180 |
| Database Sources | CysModDBdbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MAAGVAAWLP11FARAAAIGWM21PVASGPMPAP31PRQERKRTQD41ALIVLNVSGT
51-10051RFQTWQDTLE61RYPDTLLGSS71ERDFFYHPET81QQYFFDRDPD91IFRHILNFYR
101-150101TGKLHYPRHE111CISAYDEELA121FFGLIPEIIG131DCCYEEYKDR141RRENAERLQD
151-200151DADTDNTGES161ALPTMTARQR171VWRAFENPHT181STMALVFYYV191TGFFIAVSVI
201-250201ANVVETVPCG211SSPGHIKELP221CGERYAVAFF231CLDTACVMIF241TVEYLLRLAA
251-300251APSRYRFVRS261VMSIIDVVAI271LPYYIGLVMT281DNEDVSGAFV291TLRVFRVFRI
301-350301FKFSRHSQGL311RILGYTLKSC321ASELGFLLFS331LTMAIIIFAT341VMFYAEKGSS
351-400351ASKFTSIPAA361FWYTIVTMTT371LGYGDMVPKT381IAGKIFGSIC391SLSGVLVIAL
401-450401PVPVIVSNFS411RIYHQNQRAD421KRRAQKKARL431ARIRAAKSGS441ANAYMQSKRN
451-500451GLLSNQLQSS461EDEPAFISKS471GSSFETQHHH481LLHCLEKTTN491HEFVDEQVFE
501-550501ESCMEVATVN511RPSSHSPSLS521SQQGVTSTCC531SRRHKKTFRI541PNANVSGSHR
551-600551GSVQELSTIQ561IRCVERTPLS571NSRSSLNAKM581EECVKLNCEQ591PYVTTAIISI
601-630601PTPPVTTPEG611DDRPESPEYS621GGNIVRVSAL
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 111 | - | - | - |
Deep-Palm: 0.13
|
|
| 132 | - | - | - |
GPS-Palm: 0.90
Deep-Palm: 0.53
|
|
| 133 | - | - | - |
Deep-Palm: 0.69
|
|
| 209 | - | - | - |
Deep-Palm: 0.86
|
|
| 221 | - | - | - |
Deep-Palm: 0.70
|
|
| 231 | - | - | - |
Deep-Palm: 0.18
|
|
| 236 | - | - | - |
Deep-Palm: 0.24
|
|
| 320 | - | - | - |
GPS-Palm: 0.90
Deep-Palm: 0.95
|
|
| 390 | - | - | - |
Deep-Palm: 0.89
|
|
| 484 | Domain of unknown function (DUF3399) |
Brain
(34200797)
| - |
Deep-Palm: 0.21
|
|
| 503 | - | - | - |
Deep-Palm: 0.04
|
|
| 529 | - | - | - |
GPS-Palm: 0.91
Deep-Palm: 0.40
|
|
| 530 | - | - | - |
GPS-Palm: 0.90
Deep-Palm: 0.29
|
|
| 563 | - | - | - |
Deep-Palm: 0.83
|
|
| 583 | - | - | - |
Deep-Palm: 0.47
|
|
| 588 | SWISSPALM DBPTM CYSMODDB | - |
Forebrain
(28680068)
| - |
Deep-Palm: 0.28
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
4
Brain
Specificity: 1.000
4/4 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.000Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.