Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| Q9Z2W8 | Gria4 | Glutamate receptor 4 (GluR-4) (GluR4) … | Mus musculus (Mouse) | 902 aa |
Protein Details: Q9Z2W8 (Gria4)
Protein Information
| Accession | Q9Z2W8 |
|---|---|
| Protein Names | Glutamate receptor 4 (GluR-4) (GluR4) (AMPA-selective glutamate receptor 4) (GluR-D) (Glutamate receptor ionotropic, AMPA 4) (GluA4) |
| Gene Symbol | Gria4 |
| Organism | Mus musculus (Mouse) |
| Length | 902 aa |
| Isoforms | No isoforms |
| Related PMIDs | 31772009 34200797 35358180 29217618 (mass) 31311849 (mass) 31772009 (mass) 34884899 (mass) 35358180 (mass) 37925639 (mass) |
| Database Sources | dbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MRIICRQIVL11LFSGFWGLAM21GAFPSSVQIG31GLFIRNTDQE41YTAFRLAIFL
51-10051HNTSPNASEA61PFNLVPHVDN71IETANSFAVT81NAFCSQYSRG91VFAIFGLYDK
101-150101RSVHTLTSFC111SALHISLITP121SFPTEGESQF131VLQLRPSLRG141ALLSLLDHYE
151-200151WNCFVFLYDT161DRGYSILQAI171MEKAGQNGWH181VSAICVENFN191DVSYRQLLEE
201-250201LDRRQEKKFV211IDCEIERLQN221ILEQIVSVGK231HVKGYHYIIA241NLGFKDISLE
251-300251RFIHGGANVT261GFQLVDFNTP271MVTKLMDRWK281KLDQREYPGS291ETPPKYTSAL
301-350301TYDGVLVMAE311TFRSLRRQKI321DISRRGNAGD331CLANPAAPWG341QGIDMERTLK
351-400351QVRIQGLTGN361VQFDHYGRRV371NYTMDVFELK381STGPRKVGYW391NDMDKLVLIQ
401-450401DAPTLGNDTA411AIENRTVVVT421TIMESPYVMY431KKNHEMFEGN441DKYEGYCVDL
451-500451ASEIAKHIGI461KYKIAIVPDG471KYGARDADTK481IWNGMVGELV491YGKAEIAIAP
501-550501LTITLVREEV511IDFSKPFMSL521GISIMIKKPQ531KSKPGVFSFL541DPLAYEIWMC
551-600551IVFAYIGVSV561VLFLVSRFSP571YEWHTEEPED581GKEGPSDQPP591NEFGIFNSLW
601-650601FSLGAFMQQG611CDISPRSLSG621RIVGGVWWFF631TLIIISSYTA641NLAAFLTVER
651-700651MVSPIESAED661LAKQTEIAYG671TLDSGSTKEF681FRRSKIAVYE691KMWTYMRSAE
701-750701PSVFTRTTAE711GVARVRKSKG721KFAFLLESTM731NEYIEQRKPC741DTMKVGGNLD
751-800751SKGYGVATPK761GSSLRTPVNL771AVLKLSEAGV781LDKLKNKWWY791DKGECGPKDS
801-850801GSKDKTSALS811LSNVAGVFYI821LVGGLGLAML831VALIEFCYKS841RAEAKRMKLT
851-900851FSEAIRNKAR861LSITGSVGEN871GRVLTPDCPK881AVHTGTAIRQ891SSGLAVIASD
901-902901LP
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 5 | - | - | - |
GPS-Palm: 0.90
Deep-Palm: 0.02
|
|
| 84 | - | - | - |
Deep-Palm: 0.19
|
|
| 110 | - | - | - |
Deep-Palm: 0.82
|
|
| 153 | - | - | - |
Deep-Palm: 0.64
|
|
| 185 | - | - | - |
Deep-Palm: 0.60
|
|
| 213 | - | - |
Brain
(35358180)
|
Deep-Palm: 0.94
|
|
| 331 | - |
Brain
(34200797)
| - |
Deep-Palm: 0.74
|
|
| 447 | - | - | - |
Deep-Palm: 0.34
|
|
| 550 | - | - | - |
Deep-Palm: 0.07
|
|
| 611 | - | - | - |
GPS-Palm: 0.92
Deep-Palm: 0.70
|
|
| 740 | - | - | - |
Deep-Palm: 0.50
|
|
| 795 | - | - | - |
Deep-Palm: 0.85
|
|
| 837 | DBPTM SWISSPALM | - | - | - |
GPS-Palm: 0.94
Deep-Palm: 0.98
|
| 878 | - | - | - |
Deep-Palm: 0.93
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.667
2
Brain
Specificity: 0.222
2/2 (100.0%)
1
NSC
Specificity: 0.111
1/1 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
6
Brain tissue (Mass)
Specificity: 0.667
6/56 (10.7%)
Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.