Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| Q9Z331 | Krt6b | Keratin, type II cytoskeletal 6B … | Mus musculus (Mouse) | 562 aa |
Protein Details: Q9Z331 (Krt6b)
Protein Information
| Accession | Q9Z331 |
|---|---|
| Protein Names | Keratin, type II cytoskeletal 6B (Cytokeratin-6B) (CK-6B) (Keratin-6-beta) (mK6-beta) (Keratin-6B) (K6B) |
| Gene Symbol | Krt6b |
| Organism | Mus musculus (Mouse) |
| Length | 562 aa |
| Isoforms | No isoforms |
| Related PMIDs | 28526873 34200797 |
| Database Sources | CysModDBdbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MSTKTTIKSQ11TSHRGYSASS21ARVPGLNRSG31FSSVSVCRSR41GSGGSSAMCG
51-10051GAGFGSRSLY61GVGSSKRISI71GGGSCGIGGG81YGSRFGGAYG91SRFGGSFGIG
101-150101GGAGSGFGFG111GGVGFGGGYG121GAGFPVCPPG131GIQEVTINQN141LLTPLNVQID
151-200151PTIQRVRTEE161REQIKTLNNK171FASFIDKVRF181LEQQNKVLDT191KWALLQEQGT
201-250201KTVRQNLEPM211FEQYISNLRR221QLDSIIGERG231RLDSELRNMQ241DTVEDYKSKY
251-300251EDEINKRTKA261ENEFVTVKKD271VDAAYMTKVE281LQAKADSLAD291EINFLRVIYE
301-350301AELSQMQTHI311SDTSVVLSMD321NNRSLDLDSI331IAEVKAQYED341IAQRSRAEAE
351-400351SWYQTKYEEL361QVTAGRHGDD371LRNTKQEIAE381INRMIQRLRS391EIDHVKKQCA
401-450401NLQAAIADAE411QRGEMALKDA421RGKLEGLEDA431LQKAKQEMAR441LLKEYQELMN
451-500451VKLALDVEIA461TYRKLLEGEE471CRLNGEGVGP481VNISVVQSTV491SSGYGSAGGA
501-550501SSSLGLGGSS511SYSYGSSHGL521GGGFSAGSGR531AIGGGLSSSG541GLSSSTIKYT
551-562551TSASSSRKSY561RH
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 37 | Keratin type II head | - | - |
Deep-Palm: 0.92
|
|
| 49 | - | - | - |
Deep-Palm: 0.93
|
|
| 75 | - | - | - |
GPS-Palm: 0.92
Deep-Palm: 0.95
|
|
| 127 | - | - | - |
Deep-Palm: 0.80
|
|
| 399 | SWISSPALM DBPTM CYSMODDB | Intermediate filament protein |
Liver
(28526873)
| - |
Deep-Palm: 0.91
|
| 471 | Intermediate filament protein |
Brain
(34200797)
|
Liver
(37925639)
Brain
(35358180)
Brain
(31311849)
|
Deep-Palm: 0.97
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.667
2
Brain
Specificity: 0.667
2/2 (100.0%)
1
Liver
Specificity: 0.333
1/1 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.000Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.