Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| V9GWV1 | Arfgap1 | ADP-ribosylation factor GTPase-activating protein 1 … | Mus musculus (Mouse) | 402 aa |
Protein Details: V9GWV1 (Arfgap1)
Protein Information
| Accession | V9GWV1 |
|---|---|
| Protein Names | ADP-ribosylation factor GTPase-activating protein 1 (ADP-ribosylation factor 1 GTPase-activating protein) (ARF1-directed GTPase-activating protein) |
| Gene Symbol | Arfgap1 |
| Organism | Mus musculus (Mouse) |
| Length | 402 aa |
| Isoforms | No isoforms |
| Related PMIDs | 29660268 29217618 (mass) 31311849 (mass) 31772009 (mass) 34884899 (mass) 35358180 (mass) 37925639 (mass) |
| Database Sources | SwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MASPRTRKVL11KEVRAQDENN21VCFECGAFNP31QWVSVTYGIW41ICLECSGRHR
51-10051GLGVHLSFVR61SVTMDKWKDI71ELEKMKAGGN81AKFREFLETQ91DDYEPSWSLQ
101-150101DKYSSRAAAL111FRDKVATLAE121GKEWSLESSP131AQNWTPPQPK141TLQFTAHRAS
151-200151GQPQSAAASG161DKAFEDWLND171DLGSYQGAQE181NRYVGFGNTV191PPQKREDDFL
201-250201NNAMSSLYSG211WSSFTTGASK221FASAAKEGAT231KFGSQASQKF241WGYKQQSEPA
251-300251SELGHSLNEN261VLKPAQEKGV271GSKGWRDVTT281FFSGKAEDSS291DRPLEGHSYQ
301-350301NSSGDNSQNS311NIDQSFWETF321GSAEPPKAKS331PSSDSWTCAD341ASTGRRSSDS
351-400351WDVWGSGSAS361NNKNSNSDGW371ESWEGASGEG381RAKATKKAAP391STADEGWDNQ
401-402401NW
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 22 | ArfGAP domain superfamily ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN 1 ARFGAP/RecO-like zinc finger Arf GTPase activating protein | - | - |
Deep-Palm: 0.18
|
|
| 25 | ArfGAP domain superfamily ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN 1 Arf GTPase activating protein ARFGAP/RecO-like zinc finger | - | - |
Deep-Palm: 0.08
|
|
| 42 | ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN 1 ArfGAP domain superfamily Arf GTPase activating protein ARFGAP/RecO-like zinc finger | - | - |
GPS-Palm: 0.76
Deep-Palm: 0.16
|
|
| 45 | ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN 1 ArfGAP domain superfamily Arf GTPase activating protein ARFGAP/RecO-like zinc finger | - | - |
GPS-Palm: 0.87
Deep-Palm: 0.19
|
|
| 338 | - | - |
Brain
(35358180)
|
Deep-Palm: 0.69
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
1
Brain
Specificity: 0.056
1/1 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
17
Brain tissue (Mass)
Specificity: 0.944
17/56 (30.4%)
Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.