Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| V9GYP5 | N/A | 18S rRNA (pseudouridine(1248)-N1)-methyltransferase (18S rRNA … | Homo sapiens (Human) | 217 aa |
Protein Details: V9GYP5
Protein Information
| Accession | V9GYP5 |
|---|---|
| Protein Names | 18S rRNA (pseudouridine(1248)-N1)-methyltransferase (18S rRNA Psi1248 methyltransferase) (Nucleolar protein EMG1 homolog) (Protein C2f) (Ribosome biogenesis protein NEP1) |
| Gene Symbol | Not available |
| Organism | Homo sapiens (Human) |
| Length | 217 aa |
| Isoforms | No isoforms |
| Related PMIDs | 31251020 |
| Database Sources | No database sources |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501GFKPRERSGG11EQAQDWDALP21PKRPRLGAGN31KIGGRRLIVV41LEGASLETVK
51-10051VGKTYELLNC61DKHKSILLKN71GRDPGEARPD81ITHQSLLMLM91DSPLNRAGLL
101-150101QVYIHTQKNV111LIEVNPQTRI121PRTFDRFCGL131MVQLLHKLSV141RAADGPQKLL
151-200151KVIKNPVSDH161FPVGCMKVGT171SFSIPVVSDV181RELVPSSDPI191VFVVGAFAHG
201-217201KRCDLLCCPD211LSAVAQS
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 60 | - | - | - |
GPS-Palm: 0.88
Deep-Palm: 0.90
|
|
| 128 | - | - | - |
GPS-Palm: 0.88
Deep-Palm: 0.82
|
|
| 165 | - | - | - |
Deep-Palm: 0.61
|
|
| 203 | - | - | - |
GPS-Palm: 0.74
Deep-Palm: 0.74
|
|
| 207 | - | - | - |
GPS-Palm: 0.80
Deep-Palm: 0.07
|
|
| 208 | - | - | - |
GPS-Palm: 0.76
Deep-Palm: 0.07
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
1
LNCaP
Specificity: 1.000
1/1 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.000Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.