Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| V9GZ17 | TUBA8 | Tubulin alpha 8 | Homo sapiens (Human) | 275 aa |
Protein Details: V9GZ17 (TUBA8)
Protein Information
| Accession | V9GZ17 |
|---|---|
| Protein Names | Tubulin alpha 8 |
| Gene Symbol | TUBA8 |
| Organism | Homo sapiens (Human) |
| Length | 275 aa |
| Isoforms | No isoforms |
| Related PMIDs | No related PMIDs |
| Database Sources | CysModDBdbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501XFDGALNVDL11TEFQTNLVPY21PRIHFPLVTY31APIISAEKAY41HEQLSVAEIT
51-10051SSCFEPNSQM61VKCDPRHGKY71MACCMLYRGD81VVPKDVNVAI91AAIKTKRTIQ
101-150101FVDWCPTGFK111VGINYQPPTV121VPGGDLAKVQ131RAVCMLSNTT141AIAEAWARLD
151-200151HKFDLMYAKR161AFVHCQRIQL171GISCSSMTSL181VSASLEPFLK191AVFDFHESFE
201-250201DGRPADLQNA211PRFGLARTRV221LAKGFRLLTF231DGNSTEVIPR241WLHSVLWWHA
251-275251IPVFPALMTF261LYRIFTLITF271FIVIM
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 53 | - | - | - |
Deep-Palm: 0.18
|
|
| 63 | - | - | - |
Deep-Palm: 0.05
|
|
| 73 | - | - | - |
GPS-Palm: 0.68
Deep-Palm: 0.18
|
|
| 74 | - | - | - |
GPS-Palm: 0.91
Deep-Palm: 0.33
|
|
| 105 | SWISSPALM DBPTM CYSMODDB | Tubulin C-terminal domain | - |
cerebral cortex
(36430497)
Unknown
(32651440)
|
GPS-Palm: 0.85
Deep-Palm: 0.37
|
| 134 | - | - |
cerebral cortex
(36430497)
Unknown
(32651440)
|
GPS-Palm: 0.92
Deep-Palm: 0.97
|
|
| 165 | - | - | - |
GPS-Palm: 0.78
Deep-Palm: 0.39
|
|
| 174 | - | - | - |
Deep-Palm: 0.88
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
TCGA Cysteine Mutation Information
Note: Mutations indicate amino acid changes that may create potential palmitoylation sites.
| Position | Amino Acid Change | Frequency | Type | Function | Cancer Type |
|---|---|---|---|---|---|
| 20 | C → C | 0.002033 | SNP | Silent | THCA |
| 121 | R → C | 0.003460 | SNP | Missense Mutation | CESC |
| 214 | R → C | 0.001887 | SNP | Missense Mutation | UCEC |
| 264 | R → C | 0.002141 | SNP | Missense Mutation | SKCM |
| 294 | S → C | 0.003460 | SNP | Missense Mutation | CESC |
| 305 | C → C | 0.001887 | SNP | Silent | UCEC |
| 333 | A → Cfs*88 | 0.002033 | INS | Frame Shift Ins | LUSC |