Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| X6R3U4 | PLEKHH3 | Pleckstrin homology domain-containing family H … | Homo sapiens (Human) | 790 aa |
Protein Details: X6R3U4 (PLEKHH3)
Protein Information
| Accession | X6R3U4 |
|---|---|
| Protein Names | Pleckstrin homology domain-containing family H member 3 |
| Gene Symbol | PLEKHH3 |
| Organism | Homo sapiens (Human) |
| Length | 790 aa |
| Isoforms | No isoforms |
| Related PMIDs | 31251020 |
| Database Sources | CysModDBdbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MPLPGGLWWL11LCCRRGFTLL21HRDYGDGELS31GDGDEDEDEE41TFELRTPSPA
51-10051GGGRGPLEVT61LTQPVRSGPV71SNRLQSWEET81WSLIPEKGLP91EDDPDIVVKG
101-150101WLYREPRGGG111ARPWLPPRRA121WFVLTRDSLD131QFSSSGKGAR141RLGSLVLTSL
151-200151CSVTGPERRR161KETGLWSVTV171SGRKHSVRLC181SPRQAEAERW191GVALREVIAS
201-250201KAPLETPTQL211LLRDIQESCG221DPEAVALIYL231RNPILRHTSG241ALYAPLLPLP
251-300251YGVSAPGPGY261APLREEAVRL271FLALQALEGA281RRPGPLMQGV291LQTCRDLPAL
301-350301RDELFLQLAK311QTSGPAGPPG321LPATQDPAAL331RYWQLLTCMS341CTFRPGGAVR
351-400351GHLLGHLERT361EQALPDSELA371EYARFIRKAL381GRTRGRELVP391SLAEISALSQ
401-450401RQELLCTVHC411PGAGACAVAI421DSHTTAGEVA431RELVGRLGLA441RSRNAFALYE
451-500451QRGAQERALA461GGTLVADVLT471SLAAEEAGLE481DSPDSGWRLC491LRLHGPLHPE
501-550501GLSPDGHELP511FLFEQAHALL521LRGRPPPPDD531TLRALAALRL541QSLQRDFSPR
551-600551VPLPRLDRLL561PPPAPPREDP571PRPTPRPPPS581AALLAGALWS591PGLAKRRAER
601-650601ARRGGAGRTA611GSIAREGGGG621AGTAAAVLGG631WKRLRGMGRA641EAMAAYLALA
651-700651AQCPGFGAAR661YDVLELSTEP671GRGAPQKLCL681GLGAKAMSLS691RPGETEPIHS
701-750701VSYGHVAACQ711LMGPHTLALR721VGESQLLLQS731PQVEEIMQLV741NAYLANPSPE
751-790751RPCSSSSPPC761QDLPDTSPPS771QRPGLDEPQG781QSGCLGQLQD
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 12 | SWISSPALM DBPTM CYSMODDB | - | - | - |
GPS-Palm: 0.94
Deep-Palm: 0.16
|
| 13 | SWISSPALM DBPTM CYSMODDB | - | - | - |
GPS-Palm: 0.94
Deep-Palm: 0.50
|
| 151 | - | - | - |
GPS-Palm: 0.95
Deep-Palm: 0.98
|
|
| 180 | - | - | - |
GPS-Palm: 0.79
Deep-Palm: 0.93
|
|
| 219 | - | - | - |
Deep-Palm: 0.97
|
|
| 294 | - | - | - |
GPS-Palm: 0.78
Deep-Palm: 0.98
|
|
| 338 | - | - | - |
GPS-Palm: 0.92
Deep-Palm: 0.91
|
|
| 341 | - | - | - |
GPS-Palm: 0.81
Deep-Palm: 0.93
|
|
| 406 | - | - | - |
Deep-Palm: 0.96
|
|
| 410 | - | - | - |
GPS-Palm: 0.67
Deep-Palm: 0.93
|
|
| 416 | - | - | - |
Deep-Palm: 0.87
|
|
| 490 | - | - | - |
Deep-Palm: 0.98
|
|
| 653 | - | - | - |
GPS-Palm: 0.91
Deep-Palm: 0.98
|
|
| 679 | - | - | - |
GPS-Palm: 0.93
Deep-Palm: 0.98
|
|
| 709 | - | - | - |
Deep-Palm: 0.92
|
|
| 753 | - | - | - |
Deep-Palm: 0.56
|
|
| 760 | - | - | - |
Deep-Palm: 0.70
|
|
| 784 | - | - | - |
GPS-Palm: 0.82
Deep-Palm: 0.05
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
3
LNCaP
Specificity: 1.000
3/3 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.000Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.
Conservation score for cysteine
PhyloP for Cysteine
PhastCons Conservation Scores for Cysteine
TCGA Cysteine Mutation Information
Note: Mutations indicate amino acid changes that may create potential palmitoylation sites.
| Position | Amino Acid Change | Frequency | Type | Function | Cancer Type |
|---|---|---|---|---|---|
| 189 | R → C | 0.002506 | SNP | Missense Mutation | COAD |
| 516 | F → C | 0.001887 | SNP | Missense Mutation | UCEC |
| 757 | S → C | 0.002288 | SNP | Missense Mutation | STAD |