Palmitoylated Protein Network
Analysis Guide
What You Can Do
- Discover Partners: Find protein interaction partners with significant associations
- Visualize Network: Interactive network graph with color-coded relationships
- Multi-level Analysis: Analyze both direct and indirect interactions
- Relationship Types: Differentiate between co-occurrence and mutual exclusion
Analysis Features
- Statistical Analysis: OR, P-value, FDR-corrected P-value
- Jaccard Index: Jaccard similarity coefficient
- Relationship Assessment: Based on corrected P-value, OR and Jaccard
- Network Visualization: Interactive color-coded graph
Relationship Criteria:
• Co-occurrence: Corrected P-value < 0.05, OR > 1, Jaccard > 0.2
• Mutual-exclusion: Corrected P-value < 0.05, OR < 1, Jaccard < 0.05
• Weak associations: Corrected P-value < 0.05 but Jaccard doesn't meet thresholds
• Note: Only significant relationships (non-Independent) are displayed
• Co-occurrence: Corrected P-value < 0.05, OR > 1, Jaccard > 0.2
• Mutual-exclusion: Corrected P-value < 0.05, OR < 1, Jaccard < 0.05
• Weak associations: Corrected P-value < 0.05 but Jaccard doesn't meet thresholds
• Note: Only significant relationships (non-Independent) are displayed